RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 AOC2O75106 756 aa21.33■■□□□ 1
SYNE4-201ENST00000324444 RPS6KB1P23443 525 aa21.33■■□□□ 1
SYNE4-201ENST00000324444 CRKP46108 304 aa21.33■■□□□ 1
SYNE4-201ENST00000324444 HUNKP57058 714 aa21.33■■□□□ 1
SYNE4-201ENST00000324444 NBPF9Q3BBW0 867 aa21.33■■□□□ 1
SYNE4-201ENST00000324444 SBK1Q52WX2 424 aa21.33■■□□□ 1
SYNE4-201ENST00000324444 ZDHHC15Q96MV8 337 aa21.33■■□□□ 1
SYNE4-201ENST00000324444 PRKAB2O43741 272 aa21.32■■□□□ 1
SYNE4-201ENST00000324444 CTCFP49711 727 aaPredicted RBP21.32■■□□□ 1
SYNE4-201ENST00000324444 DHX32Q7L7V1 743 aaKnown RBP21.32■■□□□ 1
SYNE4-201ENST00000324444 TEX11Q8IYF3 940 aa21.32■■□□□ 1
SYNE4-201ENST00000324444 TNS4Q8IZW8 715 aa21.32■■□□□ 1
SYNE4-201ENST00000324444 C2orf69Q8N8R5 385 aa21.32■■□□□ 1
SYNE4-201ENST00000324444 KRT23Q9C075 422 aa21.32■■□□□ 1
SYNE4-201ENST00000324444 EPB41L4AQ9HCS5 686 aaPredicted RBP21.32■■□□□ 1
SYNE4-201ENST00000324444 THSD7BQ9C0I4 1608 aa21.32■■□□□ 1
SYNE4-201ENST00000324444 WDR19Q8NEZ3 1342 aa21.32■■□□□ 1
SYNE4-201ENST00000324444 LAMA4Q16363 1823 aa21.31■■□□□ 1
SYNE4-201ENST00000324444 ADCK5Q3MIX3 580 aa21.31■■□□□ 1
SYNE4-201ENST00000324444 APOBEC3HQ6NTF7 200 aaKnown RBP21.31■■□□□ 1
SYNE4-201ENST00000324444 SDR42E1Q8WUS8 393 aa21.31■■□□□ 1
SYNE4-201ENST00000324444 CDCA5Q96FF9 252 aa21.31■■□□□ 1
SYNE4-201ENST00000324444 UPF3BQ9BZI7 483 aaKnown RBP21.31■■□□□ 1
SYNE4-201ENST00000324444 DCP1AQ9NPI6 582 aaPredicted RBP21.31■■□□□ 1
SYNE4-201ENST00000324444 SCAF8Q9UPN6 1271 aaKnown RBP21.31■■□□□ 1
SYNE4-201ENST00000324444 PITPNM2Q9BZ72 1349 aa21.31■■□□□ 1
SYNE4-201ENST00000324444 NAV1Q8NEY1 1877 aa21.31■■□□□ 1
SYNE4-201ENST00000324444 RHBDL3P58872 404 aa21.3■■□□□ 1
SYNE4-201ENST00000324444 MFSD6Q6ZSS7 791 aa21.3■■□□□ 1
SYNE4-201ENST00000324444 MTMR14Q8NCE2 650 aa21.3■■□□□ 1
SYNE4-201ENST00000324444 SH3RF3Q8TEJ3 882 aaPredicted RBP21.3■■□□□ 1
SYNE4-201ENST00000324444 CHMP4CQ96CF2 233 aa21.3■■□□□ 1
SYNE4-201ENST00000324444 ZSCAN31Q96LW9 406 aaPredicted RBP21.3■■□□□ 1
SYNE4-201ENST00000324444 ZNF287Q9HBT7 754 aa21.3■■□□□ 1
SYNE4-201ENST00000324444 TAOK2Q9UL54 1235 aa21.3■■□□□ 1
SYNE4-201ENST00000324444 WNT10BO00744 389 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 HSP90AA1P07900 732 aaKnown RBP21.29■■□□□ 1
SYNE4-201ENST00000324444 MCM5P33992 734 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 MAP2K2P36507 400 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 HAND2P61296 217 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 PPARAQ07869 468 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 AKNAD1Q5T1N1 836 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 STAG1Q8WVM7 1258 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 ZBED3Q96IU2 234 aaPredicted RBP21.29■■□□□ 1
SYNE4-201ENST00000324444 TTC14Q96N46 770 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 MTA3Q9BTC8 594 aa21.29■■□□□ 1
SYNE4-201ENST00000324444 RBM5P52756 815 aaKnown RBP eCLIP21.28■■□□□ 1
SYNE4-201ENST00000324444 FGD1P98174 961 aa21.28■■□□□ 1
SYNE4-201ENST00000324444 CFAP100Q494V2 611 aa21.28■■□□□ 1
SYNE4-201ENST00000324444 BEGAINQ9BUH8 593 aa21.28■■□□□ 1
SYNE4-201ENST00000324444 MCM9Q9NXL9 1143 aa21.28■■□□□ 1
SYNE4-201ENST00000324444 BAZ2AQ9UIF9 1905 aaKnown RBP21.28■■□□□ 1
SYNE4-201ENST00000324444 LIMCH1Q9UPQ0 1083 aa21.28■■□□□ 1
SYNE4-201ENST00000324444 PCDHAC2Q9Y5I4 1007 aa21.28■■□□□ 1
SYNE4-201ENST00000324444 LAMB1P07942 1786 aa21.27■■□□□ 1
SYNE4-201ENST00000324444 MINDY4BA8MYZ0 360 aa21.27■■□□□ 1
SYNE4-201ENST00000324444 NPM3O75607 178 aaKnown RBP21.27■■□□□ 1
SYNE4-201ENST00000324444 LBX1P52954 281 aa21.27■■□□□ 1
SYNE4-201ENST00000324444 CTR9Q6PD62 1173 aa21.27■■□□□ 1
SYNE4-201ENST00000324444 FBXL16Q8N461 479 aa21.27■■□□□ 1
SYNE4-201ENST00000324444 PRDM10Q9NQV6 1147 aa21.27■■□□□ 1
SYNE4-201ENST00000324444 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
SYNE4-201ENST00000324444 USP40Q9NVE5 1235 aa21.27■■□□□ 1
SYNE4-201ENST00000324444 SPDYE2BA6NHP3 402 aa21.26■□□□□ 0.99
SYNE4-201ENST00000324444 USP17L12C9JPN9 530 aa21.26■□□□□ 0.99
SYNE4-201ENST00000324444 USP17L21D6R901 530 aa21.26■□□□□ 0.99
SYNE4-201ENST00000324444 SPDYE6P0CI01 402 aa21.26■□□□□ 0.99
SYNE4-201ENST00000324444 HSPA8P11142 646 aaKnown RBP21.26■□□□□ 0.99
SYNE4-201ENST00000324444 PDE4BQ07343 736 aa21.26■□□□□ 0.99
SYNE4-201ENST00000324444 TGFBRAP1Q8WUH2 860 aa21.26■□□□□ 0.99
SYNE4-201ENST00000324444 POLR3DP05423 398 aaPredicted RBP21.25■□□□□ 0.99
SYNE4-201ENST00000324444 AK2P54819 239 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 PRAMEF18Q5VWM3 479 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 RGMBQ6NW40 437 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 CDC42EP5Q6NZY7 148 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 STOX1Q6ZVD7 989 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 TTC6Q86TZ1 520 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 ESR2Q92731 530 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 TMOD2Q9NZR1 351 aa21.25■□□□□ 0.99
SYNE4-201ENST00000324444 ZNF157P51786 506 aaPredicted RBP21.24■□□□□ 0.99
SYNE4-201ENST00000324444 EXOSC10Q01780 885 aaKnown RBP21.24■□□□□ 0.99
SYNE4-201ENST00000324444 NOGQ13253 232 aa21.24■□□□□ 0.99
SYNE4-201ENST00000324444 SART3Q15020 963 aaKnown RBP21.24■□□□□ 0.99
SYNE4-201ENST00000324444 DLGAP5Q15398 846 aa21.24■□□□□ 0.99
SYNE4-201ENST00000324444 TMEM87BQ96K49 555 aa21.24■□□□□ 0.99
SYNE4-201ENST00000324444 PRMT6Q96LA8 375 aaPredicted RBP21.24■□□□□ 0.99
SYNE4-201ENST00000324444 MYH1P12882 1939 aa21.24■□□□□ 0.99
SYNE4-201ENST00000324444 WDHD1O75717 1129 aaPredicted RBP21.23■□□□□ 0.99
SYNE4-201ENST00000324444 C12orf60Q5U649 245 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 APOBEC3FQ8IUX4 373 aaKnown RBP21.23■□□□□ 0.99
SYNE4-201ENST00000324444 TBC1D10CQ8IV04 446 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 ZIC5Q96T25 663 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 IDI2Q9BXS1 227 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 TAF6LQ9Y6J9 622 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 FLT1P17948 1338 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 FAM155AB1AL88 458 aaPredicted RBP21.23■□□□□ 0.99
SYNE4-201ENST00000324444 MYO1BO43795 1136 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 FGRP09769 529 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 MAPKAPK5Q8IW41 473 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 MB21D2Q8IYB1 491 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms