RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FAM83AQ86UY5 434 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 ADHFE1Q8IWW8 467 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 ANKRD13CQ8N6S4 541 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.67□□□□□ -1.02
CSTF3-201ENST00000323959 POP1Q99575 1024 aaKnown RBP8.67□□□□□ -1.02
CSTF3-201ENST00000323959 CYP2B6P20813 491 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 SLC44A5Q8NCS7 719 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 TMEM39BQ9GZU3 492 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 TMEM39AQ9NV64 488 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 SLC4A2P04920 1241 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 HMOX1P09601 288 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 AGTPBP1Q9UPW5 1226 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
CSTF3-201ENST00000323959 IL9P15248 144 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
CSTF3-201ENST00000323959 PNISRQ8TF01 805 aaKnown RBP8.66□□□□□ -1.02
CSTF3-201ENST00000323959 PHF24Q9UPV7 400 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 MYL6BP14649 208 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 CCDC152Q4G0S7 254 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 ANKRD18AQ8IVF6 992 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 CDAN1Q8IWY9 1227 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 TMEM199Q8N511 208 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 CERS5Q8N5B7 392 aa8.66□□□□□ -1.02
CSTF3-201ENST00000323959 GADL1Q6ZQY3 521 aa8.65□□□□□ -1.02
CSTF3-201ENST00000323959 PCDHAC2Q9Y5I4 1007 aa8.65□□□□□ -1.02
CSTF3-201ENST00000323959 CCT4P50991 539 aaKnown RBP8.65□□□□□ -1.03
CSTF3-201ENST00000323959 KIAA0319Q5VV43 1072 aa8.65□□□□□ -1.03
CSTF3-201ENST00000323959 ANKRD33Q7Z3H0 272 aa8.65□□□□□ -1.03
CSTF3-201ENST00000323959 LRP10Q7Z4F1 713 aa8.65□□□□□ -1.03
CSTF3-201ENST00000323959 HTATSF1O43719 755 aaKnown RBP8.64□□□□□ -1.03
CSTF3-201ENST00000323959 MAPK4P31152 587 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 MIER1Q8N108 512 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 SEMA4AQ9H3S1 761 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 IL23AQ9NPF7 189 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 DCDC2CA8MYV0 355 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 AVPR2P30518 371 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 RBM5P52756 815 aaKnown RBP eCLIP8.64□□□□□ -1.03
CSTF3-201ENST00000323959 C15orf52Q6ZUT6 534 aaKnown RBP8.64□□□□□ -1.03
CSTF3-201ENST00000323959 C16orf59Q7L2K0 433 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 CHAMP1Q96JM3 812 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 FAM208BQ5VWN6 2430 aa8.64□□□□□ -1.03
CSTF3-201ENST00000323959 TCP10L2B9ZVM9 353 aa8.63□□□□□ -1.03
CSTF3-201ENST00000323959 MORN1Q5T089 497 aa8.63□□□□□ -1.03
CSTF3-201ENST00000323959 TBX21Q9UL17 535 aa8.63□□□□□ -1.03
CSTF3-201ENST00000323959 INPP5BP32019 993 aa8.63□□□□□ -1.03
CSTF3-201ENST00000323959 ZNF365Q70YC5 407 aa8.63□□□□□ -1.03
CSTF3-201ENST00000323959 COPS6Q7L5N1 327 aa8.63□□□□□ -1.03
CSTF3-201ENST00000323959 LURAP1LQ8IV03 231 aa8.63□□□□□ -1.03
CSTF3-201ENST00000323959 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
CSTF3-201ENST00000323959 TDRD3Q9H7E2 651 aaKnown RBP8.63□□□□□ -1.03
CSTF3-201ENST00000323959 ZFHX2Q9C0A1 2572 aaPredicted RBP8.63□□□□□ -1.03
CSTF3-201ENST00000323959 COL11A1P12107 1806 aaPredicted RBP8.63□□□□□ -1.03
CSTF3-201ENST00000323959 IRS4O14654 1257 aaPredicted RBP8.62□□□□□ -1.03
CSTF3-201ENST00000323959 DMWDQ09019 674 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
CSTF3-201ENST00000323959 NEK9Q8TD19 979 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 CDC5LQ99459 802 aaKnown RBP8.62□□□□□ -1.03
CSTF3-201ENST00000323959 ISCA1Q9BUE6 129 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 A0A1B0GUL6 1792 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 ADCYAP1R1P41586 468 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 GRB10Q13322 594 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 TAF7Q15545 349 aaPredicted RBP8.62□□□□□ -1.03
CSTF3-201ENST00000323959 DZIP1LQ8IYY4 767 aaKnown RBP8.62□□□□□ -1.03
CSTF3-201ENST00000323959 CD209Q9NNX6 404 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 TMOD2Q9NZR1 351 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 DOCK1Q14185 1865 aa8.62□□□□□ -1.03
CSTF3-201ENST00000323959 A0A1B0GUL7 405 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 GTF3C2Q8WUA4 911 aaPredicted RBP8.61□□□□□ -1.03
CSTF3-201ENST00000323959 ANKRD2Q9GZV1 360 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 RALYQ9UKM9 306 aaKnown RBP8.61□□□□□ -1.03
CSTF3-201ENST00000323959 AFG3L2Q9Y4W6 797 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 MROH7Q68CQ1 1323 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 GPR179Q6PRD1 2367 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 FGBP02675 491 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 ZXDAP98168 799 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
CSTF3-201ENST00000323959 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
CSTF3-201ENST00000323959 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 H0Y858 1186 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 VCPP55072 806 aaKnown RBP8.61□□□□□ -1.03
CSTF3-201ENST00000323959 FAAP100Q0VG06 881 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 RTF1Q92541 710 aaKnown RBP8.61□□□□□ -1.03
CSTF3-201ENST00000323959 TLR9Q9NR96 1032 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 MUTYHQ9UIF7 546 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 TECTAO75443 2155 aa8.61□□□□□ -1.03
CSTF3-201ENST00000323959 IL1R1P14778 569 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 FRMD5Q7Z6J6 570 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.6□□□□□ -1.03
CSTF3-201ENST00000323959 PICK1Q9NRD5 415 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 MINPP1Q9UNW1 487 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 SLC4A7Q9Y6M7 1214 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 FAM186AA6NE01 2351 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 ZNF236Q9UL36 1845 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 ACACBO00763 2458 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 ANP32CO43423 234 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 GLRX3O76003 335 aaKnown RBP8.6□□□□□ -1.03
CSTF3-201ENST00000323959 KCNA5P22460 613 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms