RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 TFAP4Q01664 338 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 DNAJC21Q5F1R6 531 aaKnown RBP20.86■□□□□ 0.93
LTBP3-202ENST00000322147 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.86■□□□□ 0.93
LTBP3-202ENST00000322147 KIAA1468Q9P260 1216 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 CALM1P0DP23 149 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 CALM2P0DP24 149 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 CALM3P0DP25 149 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 HLFQ16534 295 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 NSUN7Q8NE18 718 aaKnown RBP20.86■□□□□ 0.93
LTBP3-202ENST00000322147 RILPL1Q5EBL4 403 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 C11orf57Q6ZUT1 292 aaPredicted RBP20.86■□□□□ 0.93
LTBP3-202ENST00000322147 IGSF22Q8N9C0 903 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 ZBTB38Q8NAP3 1195 aaPredicted RBP20.86■□□□□ 0.93
LTBP3-202ENST00000322147 TGFBRAP1Q8WUH2 860 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 TTC14Q96N46 770 aa20.86■□□□□ 0.93
LTBP3-202ENST00000322147 PFKFB2O60825 505 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 GNAT2P19087 354 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 PAFAH1B1P43034 410 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 ZYXQ15942 572 aaKnown RBP20.85■□□□□ 0.93
LTBP3-202ENST00000322147 DPCR1Q3MIW9 517 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 ZNF654Q8IZM8 581 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 FBXO18Q8NFZ0 1043 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 GDAP1L1Q96MZ0 367 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 SPAG5Q96R06 1193 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 TAB2Q9NYJ8 693 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 GOLGA6L10A6NI86 522 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 USO1O60763 962 aaKnown RBP20.85■□□□□ 0.93
LTBP3-202ENST00000322147 PDE8BO95263 885 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 DEXIO95424 95 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 NR5A1Q13285 461 aa20.85■□□□□ 0.93
LTBP3-202ENST00000322147 BMS1Q14692 1282 aaKnown RBP20.85■□□□□ 0.93
LTBP3-202ENST00000322147 CWC15Q9P013 229 aaKnown RBP20.85■□□□□ 0.93
LTBP3-202ENST00000322147 CCDC175P0C221 793 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 DYMQ7RTS9 669 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 ERO1AQ96HE7 468 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 FANCLQ9NW38 375 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 SLFN14P0C7P3 912 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 SMARCC1Q92922 1105 aaPredicted RBP20.84■□□□□ 0.93
LTBP3-202ENST00000322147 ARFGAP3Q9NP61 516 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 TBC1D7Q9P0N9 293 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 SP4Q02446 784 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 KMT5BQ4FZB7 885 aa20.84■□□□□ 0.93
LTBP3-202ENST00000322147 MORC2Q9Y6X9 1032 aaPredicted RBP20.84■□□□□ 0.93
LTBP3-202ENST00000322147 HLA-DOAP06340 250 aa20.83■□□□□ 0.93
LTBP3-202ENST00000322147 SETQ01105 290 aaPredicted RBP20.83■□□□□ 0.93
LTBP3-202ENST00000322147 FCHSD1Q86WN1 690 aa20.83■□□□□ 0.93
LTBP3-202ENST00000322147 SMYD4Q8IYR2 804 aaPredicted RBP20.83■□□□□ 0.93
LTBP3-202ENST00000322147 ZBTB21Q9ULJ3 1066 aa20.83■□□□□ 0.93
LTBP3-202ENST00000322147 ADCY9O60503 1353 aa20.83■□□□□ 0.93
LTBP3-202ENST00000322147 PLEKHG1Q9ULL1 1385 aa20.83■□□□□ 0.93
LTBP3-202ENST00000322147 AMPD3Q01432 767 aa20.83■□□□□ 0.93
LTBP3-202ENST00000322147 GPKOWQ92917 476 aaPredicted RBP eCLIP20.83■□□□□ 0.93
LTBP3-202ENST00000322147 VEZTQ9HBM0 779 aa20.83■□□□□ 0.93
LTBP3-202ENST00000322147 ERVV-2B6SEH9 535 aa20.83■□□□□ 0.92
LTBP3-202ENST00000322147 SF3B2Q13435 895 aaKnown RBP20.83■□□□□ 0.92
LTBP3-202ENST00000322147 CCDC144BQ3MJ40 725 aa20.83■□□□□ 0.92
LTBP3-202ENST00000322147 ZMYM1Q5SVZ6 1142 aa20.83■□□□□ 0.92
LTBP3-202ENST00000322147 CNBD1Q8NA66 436 aa20.83■□□□□ 0.92
LTBP3-202ENST00000322147 PIGBQ92521 554 aa20.83■□□□□ 0.92
LTBP3-202ENST00000322147 DYNLL1P63167 89 aaKnown RBP20.82■□□□□ 0.92
LTBP3-202ENST00000322147 RABEP2Q9H5N1 569 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 TNKSO95271 1327 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 RPS8P62241 208 aaKnown RBP20.82■□□□□ 0.92
LTBP3-202ENST00000322147 ADALQ6DHV7 355 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 FBXO38Q6PIJ6 1188 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 RASGRP4Q8TDF6 673 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 GOPCQ9HD26 462 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 PCDHA5Q9Y5H7 936 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 A2ML1A8K2U0 1454 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 PPRC1Q5VV67 1664 aaKnown RBP20.82■□□□□ 0.92
LTBP3-202ENST00000322147 LRRC8AQ8IWT6 810 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 CPSF1Q10570 1443 aaKnown RBP20.82■□□□□ 0.92
LTBP3-202ENST00000322147 NEFHP12036 1026 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 EVCP57679 992 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 ST5P78524 1137 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 TTC38Q5R3I4 469 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 FNBP4Q8N3X1 1017 aaPredicted RBP20.82■□□□□ 0.92
LTBP3-202ENST00000322147 TMEM51Q9NW97 253 aa20.82■□□□□ 0.92
LTBP3-202ENST00000322147 NEURL4Q96JN8 1562 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 USP27XA6NNY8 438 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 SYCP3Q8IZU3 236 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 SRRTQ9BXP5 876 aaKnown RBP20.81■□□□□ 0.92
LTBP3-202ENST00000322147 CDK12Q9NYV4 1490 aaPredicted RBP20.81■□□□□ 0.92
LTBP3-202ENST00000322147 GIGYF2Q6Y7W6 1299 aaKnown RBP20.81■□□□□ 0.92
LTBP3-202ENST00000322147 TDRD7Q8NHU6 1098 aaKnown RBP20.81■□□□□ 0.92
LTBP3-202ENST00000322147 ST7Q9NRC1 585 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 CHRNDQ07001 517 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 PPARAQ07869 468 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 POSTNQ15063 836 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 SLF2Q8IX21 1173 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 ZNF274Q96GC6 653 aaPredicted RBP20.81■□□□□ 0.92
LTBP3-202ENST00000322147 CCDC42Q96M95 316 aa20.81■□□□□ 0.92
LTBP3-202ENST00000322147 VWDEQ8N2E2 1590 aa20.8■□□□□ 0.92
LTBP3-202ENST00000322147 LUC7L2Q9Y383 392 aaKnown RBP20.8■□□□□ 0.92
LTBP3-202ENST00000322147 DEPDC5O75140 1603 aa20.8■□□□□ 0.92
LTBP3-202ENST00000322147 PCCAP05165 728 aaPredicted RBP20.8■□□□□ 0.92
LTBP3-202ENST00000322147 CDR1P51861 262 aa20.8■□□□□ 0.92
LTBP3-202ENST00000322147 ERCC6LQ2NKX8 1250 aa20.8■□□□□ 0.92
LTBP3-202ENST00000322147 TRAPPC3LQ5T215 181 aa20.8■□□□□ 0.92
LTBP3-202ENST00000322147 FANCBQ8NB91 859 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms