RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 CEBPAP49715 358 aaPredicted RBP9.01□□□□□ -0.97
RTL3-201ENST00000321110 TBC1D8BQ0IIM8 1120 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 CRYMQ14894 314 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 SLC39A14Q15043 492 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 ZNF827Q17R98 1081 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 NAA15Q9BXJ9 866 aaKnown RBP9.01□□□□□ -0.97
RTL3-201ENST00000321110 HDAC6Q9UBN7 1215 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 METP08581 1390 aa9□□□□□ -0.97
RTL3-201ENST00000321110 ANXA1P04083 346 aa9□□□□□ -0.97
RTL3-201ENST00000321110 PDCLQ13371 301 aa9□□□□□ -0.97
RTL3-201ENST00000321110 SYNE3Q6ZMZ3 975 aa9□□□□□ -0.97
RTL3-201ENST00000321110 FAM43BQ6ZT52 329 aaPredicted RBP9□□□□□ -0.97
RTL3-201ENST00000321110 B4GALNT4Q76KP1 1039 aa9□□□□□ -0.97
RTL3-201ENST00000321110 APTXQ7Z2E3 356 aaKnown RBP9□□□□□ -0.97
RTL3-201ENST00000321110 BRAPQ7Z569 592 aa9□□□□□ -0.97
RTL3-201ENST00000321110 TXNDC2Q86VQ3 553 aa9□□□□□ -0.97
RTL3-201ENST00000321110 IL17REQ8NFR9 667 aa9□□□□□ -0.97
RTL3-201ENST00000321110 GPHNQ9NQX3 736 aaPredicted RBP9□□□□□ -0.97
RTL3-201ENST00000321110 DDX20Q9UHI6 824 aaKnown RBP9□□□□□ -0.97
RTL3-201ENST00000321110 TTF2Q9UNY4 1162 aaKnown RBP9□□□□□ -0.97
RTL3-201ENST00000321110 CEMIPQ8WUJ3 1361 aa9□□□□□ -0.97
RTL3-201ENST00000321110 MFAP3LO75121 409 aa9□□□□□ -0.97
RTL3-201ENST00000321110 HMGB1P09429 215 aaKnown RBP9□□□□□ -0.97
RTL3-201ENST00000321110 CCNHP51946 323 aaPredicted RBP9□□□□□ -0.97
RTL3-201ENST00000321110 SMTNP53814 917 aa9□□□□□ -0.97
RTL3-201ENST00000321110 ERVK-24P63145 666 aa9□□□□□ -0.97
RTL3-201ENST00000321110 KIF23Q02241 960 aaPredicted RBP9□□□□□ -0.97
RTL3-201ENST00000321110 CCNI2Q6ZMN8 369 aaPredicted RBP9□□□□□ -0.97
RTL3-201ENST00000321110 TRAPPC11Q7Z392 1133 aa9□□□□□ -0.97
RTL3-201ENST00000321110 HOMEZQ8IX15 550 aa9□□□□□ -0.97
RTL3-201ENST00000321110 KIRREL3Q8IZU9 778 aa9□□□□□ -0.97
RTL3-201ENST00000321110 ENOX1Q8TC92 643 aaKnown RBP9□□□□□ -0.97
RTL3-201ENST00000321110 TRIM6Q9C030 488 aaPredicted RBP9□□□□□ -0.97
RTL3-201ENST00000321110 CHPF2Q9P2E5 772 aa9□□□□□ -0.97
RTL3-201ENST00000321110 TRIM10Q9UDY6 481 aa9□□□□□ -0.97
RTL3-201ENST00000321110 HOOK1Q9UJC3 728 aaKnown RBP9□□□□□ -0.97
RTL3-201ENST00000321110 MAN1B1Q9UKM7 699 aa9□□□□□ -0.97
RTL3-201ENST00000321110 LRRC37A3O60309 1634 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 FAM237AA0A1B0GTK4 181 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 FRMD3A2A2Y4 597 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 TARSL2A2RTX5 802 aaKnown RBP8.99□□□□□ -0.97
RTL3-201ENST00000321110 ENC1O14682 589 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 SRGAP2O75044 1071 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 ERCC3P19447 782 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 MCM3P25205 808 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 CALRP27797 417 aaKnown RBP8.99□□□□□ -0.97
RTL3-201ENST00000321110 CASP14P31944 242 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 PBX1P40424 430 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 FXR1P51114 621 aaKnown RBP eCLIP8.99□□□□□ -0.97
RTL3-201ENST00000321110 MDM2Q00987 491 aaPredicted RBP8.99□□□□□ -0.97
RTL3-201ENST00000321110 TEFQ10587 303 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 CCDC40Q4G0X9 1142 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 CEP85LQ5SZL2 805 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 FAM228AQ86W67 206 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 PPFIBP1Q86W92 1011 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 NUTM2AQ8IVF1 878 aaPredicted RBP8.99□□□□□ -0.97
RTL3-201ENST00000321110 ANKRD18AQ8IVF6 992 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 ZNF274Q96GC6 653 aaPredicted RBP8.99□□□□□ -0.97
RTL3-201ENST00000321110 HINFPQ9BQA5 517 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 VCPKMTQ9H867 229 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 POLD4Q9HCU8 107 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 TECPR2O15040 1411 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 KLHL33A6NCF5 533 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 PDHBP11177 359 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 IRX1P78414 480 aaPredicted RBP8.99□□□□□ -0.97
RTL3-201ENST00000321110 SKOR1P84550 965 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 SLC9C2Q5TAH2 1124 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 RESP18Q5W5W9 173 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 FMNL3Q8IVF7 1028 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 CCDC13Q8IYE1 715 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 ARL8AQ96BM9 186 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 RRP36Q96EU6 259 aaKnown RBP8.99□□□□□ -0.97
RTL3-201ENST00000321110 CENPHQ9H3R5 247 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 SLC40A1Q9NP59 571 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 MYO1AQ9UBC5 1043 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 KDRP35968 1356 aa8.99□□□□□ -0.97
RTL3-201ENST00000321110 TMCO5BA8MYB1 307 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 GYPCP04921 128 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 FECHP22830 423 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 NAP1L1P55209 391 aaKnown RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 GRIK3Q13003 919 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 G3BP1Q13283 466 aaKnown RBP eCLIP8.98□□□□□ -0.97
RTL3-201ENST00000321110 PTPAQ15257 358 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 TTMPQ5BVD1 217 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 CCDC102BQ68D86 513 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 TLDC1Q6P9B6 456 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 YTHDF3Q7Z739 585 aaKnown RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 AENQ8WTP8 325 aaKnown RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 CEP170BQ9Y4F5 1589 aaPredicted RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 GNAT3A8MTJ3 354 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 GOLGA8KD6RF30 607 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 E7EWF7 191 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 SKAP2O75563 359 aaPredicted RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 ATP1A1P05023 1023 aaKnown RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 CLNS1AP54105 237 aaKnown RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 SARNPP82979 210 aaKnown RBP8.98□□□□□ -0.97
RTL3-201ENST00000321110 MCMDC2Q4G0Z9 681 aa8.98□□□□□ -0.97
RTL3-201ENST00000321110 NAA35Q5VZE5 725 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms