RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 PPFIBP1Q86W92 1011 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 IGSF22Q8N9C0 903 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 RIN2Q8WYP3 895 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 USP21Q9UK80 565 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 ADGRG1Q9Y653 693 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 PLEKHG2Q9H7P9 1386 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 TOPAZ1Q8N9V7 1692 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 RGPD3A6NKT7 1758 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 RGPD4Q7Z3J3 1758 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 APPP05067 770 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 METAP2P50579 478 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 POSTNQ15063 836 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 SLC9C2Q5TAH2 1124 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 RESP18Q5W5W9 173 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 ZNF790Q6PG37 636 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 SMYD4Q8IYR2 804 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 ZNF496Q96IT1 587 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 MED15Q96RN5 788 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 JRKLQ9Y4A0 524 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 MYH15Q9Y2K3 1946 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 RGPD8O14715 1765 aaPredicted RBP11□□□□□ -0.65
PTPRA-202ENST00000318266 ZMYND10O75800 440 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 LRRC31Q6UY01 552 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 NFXL1Q6ZNB6 911 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 NCOA7Q8NI08 942 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 PUS3Q9BZE2 481 aaKnown RBP11□□□□□ -0.65
PTPRA-202ENST00000318266 SEC31BQ9NQW1 1179 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 GLI3P10071 1580 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 CTAGE9A4FU28 777 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 ZNF213O14771 459 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 FOXP2O15409 715 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 AFMP43652 599 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 TRDNQ13061 729 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 USP49Q70CQ1 688 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
PTPRA-202ENST00000318266 CEP112Q8N8E3 955 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 GPATCH11Q8N954 259 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 PUS7LQ9H0K6 701 aaKnown RBP11□□□□□ -0.65
PTPRA-202ENST00000318266 INCENPQ9NQS7 918 aa11□□□□□ -0.65
PTPRA-202ENST00000318266 CTAGE15A4D2H0 777 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 CTAGE8P0CG41 777 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 CCT6AP40227 531 aaKnown RBP10.99□□□□□ -0.65
PTPRA-202ENST00000318266 TRIM29Q14134 588 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 CTAGE6Q86UF2 777 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 CTAGE4Q8IX94 777 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 CDC25AP30304 524 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 ADORA1P30542 326 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 CASP14P31944 242 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 MAGEA9P43362 315 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 AMOTQ4VCS5 1084 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 MAP3K14Q99558 947 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 HOOK1Q9UJC3 728 aaKnown RBP10.99□□□□□ -0.65
PTPRA-202ENST00000318266 KCNJ14Q9UNX9 436 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 BCL9LQ86UU0 1499 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 ABCA3Q99758 1704 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 LAMA4Q16363 1823 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 PLCH1Q4KWH8 1693 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 LOC102724159A0A0B4J2E5 919 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 BTBD18B2RXH4 712 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 ENC1O14682 589 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 ZNF18P17022 549 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 PWP2Q15269 919 aaKnown RBP10.99□□□□□ -0.65
PTPRA-202ENST00000318266 CMTR1Q8N1G2 835 aaKnown RBP10.99□□□□□ -0.65
PTPRA-202ENST00000318266 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
PTPRA-202ENST00000318266 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
PTPRA-202ENST00000318266 RNF40O75150 1001 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 PPP6R2O75170 966 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 SCARF1Q14162 830 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 GSPT2Q8IYD1 628 aaKnown RBP10.98□□□□□ -0.65
PTPRA-202ENST00000318266 STAMQ92783 540 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 RFX7Q2KHR2 1363 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 B4E1Z4 1266 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 IQUBQ8NA54 791 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 ANKRD24Q8TF21 1146 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 TRIM10Q9UDY6 481 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 TFR2Q9UP52 801 aa10.98□□□□□ -0.65
PTPRA-202ENST00000318266 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 IARSP41252 1262 aaKnown RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 FXR1P51114 621 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 SF3B2Q13435 895 aaKnown RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 NR1I3Q14994 352 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 RABL6Q3YEC7 729 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 CYB5R4Q7L1T6 521 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 MICALL1Q8N3F8 863 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 HNRNPLLQ8WVV9 542 aaKnown RBP10.97□□□□□ -0.65
PTPRA-202ENST00000318266 CAPZA3Q96KX2 299 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 PHF8Q9UPP1 1060 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 NRAPQ86VF7 1730 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 MSANTD4Q8NCY6 345 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 SLF1Q9BQI6 1058 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 HDAC6Q9UBN7 1215 aa10.97□□□□□ -0.65
PTPRA-202ENST00000318266 RAB21Q9UL25 225 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms