RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SLURP2P0DP57 97 aa21.63■■□□□ 1.05
TPM1-203ENST00000317516 HOXD10P28358 340 aa21.63■■□□□ 1.05
TPM1-203ENST00000317516 TTF1Q15361 905 aaPredicted RBP21.63■■□□□ 1.05
TPM1-203ENST00000317516 GPAT2Q6NUI2 795 aa21.63■■□□□ 1.05
TPM1-203ENST00000317516 GADL1Q6ZQY3 521 aa21.63■■□□□ 1.05
TPM1-203ENST00000317516 ARMC5Q96C12 935 aa21.63■■□□□ 1.05
TPM1-203ENST00000317516 TRIM34Q9BYJ4 488 aa21.63■■□□□ 1.05
TPM1-203ENST00000317516 SLC45A1Q9Y2W3 748 aa21.63■■□□□ 1.05
TPM1-203ENST00000317516 FAM196BA6NMK8 535 aa21.62■■□□□ 1.05
TPM1-203ENST00000317516 APBB1O00213 710 aa21.62■■□□□ 1.05
TPM1-203ENST00000317516 CAP2P40123 477 aa21.62■■□□□ 1.05
TPM1-203ENST00000317516 CAP1Q01518 475 aa21.62■■□□□ 1.05
TPM1-203ENST00000317516 ADGRA1Q86SQ6 560 aa21.62■■□□□ 1.05
TPM1-203ENST00000317516 MAPKAPK5Q8IW41 473 aa21.62■■□□□ 1.05
TPM1-203ENST00000317516 SLC9C1Q4G0N8 1177 aa21.61■■□□□ 1.05
TPM1-203ENST00000317516 SIRT2Q8IXJ6 389 aa21.61■■□□□ 1.05
TPM1-203ENST00000317516 CRACR2BQ8N4Y2 399 aaPredicted RBP21.61■■□□□ 1.05
TPM1-203ENST00000317516 MAGEB6Q8N7X4 407 aa21.61■■□□□ 1.05
TPM1-203ENST00000317516 FLT1P17948 1338 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 USP17L5A8MUK1 530 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 FMNL1O95466 1100 aaPredicted RBP21.6■■□□□ 1.05
TPM1-203ENST00000317516 HLA-DOAP06340 250 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 CYP2C8P10632 490 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 PSMC4P43686 418 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 ZNF280CQ8ND82 737 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 TMEM106CQ9BVX2 250 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 ARHGAP39Q9C0H5 1083 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 AS3MTQ9HBK9 375 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 PTCH2Q9Y6C5 1203 aa21.6■■□□□ 1.05
TPM1-203ENST00000317516 USP5P45974 858 aa21.59■■□□□ 1.05
TPM1-203ENST00000317516 DYNLL1P63167 89 aaKnown RBP21.59■■□□□ 1.05
TPM1-203ENST00000317516 SPP2Q13103 211 aa21.59■■□□□ 1.05
TPM1-203ENST00000317516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.59■■□□□ 1.05
TPM1-203ENST00000317516 ANTXR1Q9H6X2 564 aa21.59■■□□□ 1.05
TPM1-203ENST00000317516 GINM1Q9NU53 330 aa21.59■■□□□ 1.05
TPM1-203ENST00000317516 PALD1Q9ULE6 856 aa21.59■■□□□ 1.05
TPM1-203ENST00000317516 AGTPBP1Q9UPW5 1226 aa21.59■■□□□ 1.05
TPM1-203ENST00000317516 ADGRA2Q96PE1 1338 aa21.58■■□□□ 1.05
TPM1-203ENST00000317516 ASNSP08243 561 aa21.58■■□□□ 1.05
TPM1-203ENST00000317516 METTL16Q86W50 562 aaKnown RBP21.58■■□□□ 1.05
TPM1-203ENST00000317516 MIGA1Q8NAN2 632 aa21.58■■□□□ 1.05
TPM1-203ENST00000317516 PROCA1Q8NCQ7 364 aaPredicted RBP21.58■■□□□ 1.05
TPM1-203ENST00000317516 SMCR8Q8TEV9 937 aaPredicted RBP21.58■■□□□ 1.05
TPM1-203ENST00000317516 BCL11AQ9H165 835 aa21.58■■□□□ 1.05
TPM1-203ENST00000317516 PNMA3Q9UL41 463 aa21.58■■□□□ 1.05
TPM1-203ENST00000317516 NDUFB9Q9Y6M9 179 aa21.58■■□□□ 1.05
TPM1-203ENST00000317516 FCGRTP55899 365 aa21.57■■□□□ 1.04
TPM1-203ENST00000317516 PABPC4Q13310 644 aaKnown RBP eCLIP21.57■■□□□ 1.04
TPM1-203ENST00000317516 CCDC84Q86UT8 332 aaPredicted RBP21.57■■□□□ 1.04
TPM1-203ENST00000317516 ZNF333Q96JL9 665 aa21.57■■□□□ 1.04
TPM1-203ENST00000317516 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.57■■□□□ 1.04
TPM1-203ENST00000317516 BCRP11274 1271 aa21.56■■□□□ 1.04
TPM1-203ENST00000317516 SLC9C2Q5TAH2 1124 aa21.56■■□□□ 1.04
TPM1-203ENST00000317516 TRIM47Q96LD4 638 aa21.56■■□□□ 1.04
TPM1-203ENST00000317516 SRRDQ9UH36 339 aa21.56■■□□□ 1.04
TPM1-203ENST00000317516 SAP30BPQ9UHR5 308 aaKnown RBP21.56■■□□□ 1.04
TPM1-203ENST00000317516 DOCK2Q92608 1830 aa21.55■■□□□ 1.04
TPM1-203ENST00000317516 ECM2O94769 699 aaPredicted RBP21.55■■□□□ 1.04
TPM1-203ENST00000317516 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
TPM1-203ENST00000317516 TTC6Q86TZ1 520 aa21.55■■□□□ 1.04
TPM1-203ENST00000317516 RAET1EQ8TD07 263 aa21.55■■□□□ 1.04
TPM1-203ENST00000317516 DNAJC2Q99543 621 aaKnown RBP21.55■■□□□ 1.04
TPM1-203ENST00000317516 WDR18Q9BV38 432 aa21.55■■□□□ 1.04
TPM1-203ENST00000317516 MAGEB6P1A0A0J9YX57 407 aa21.54■■□□□ 1.04
TPM1-203ENST00000317516 OSBPP22059 807 aa21.54■■□□□ 1.04
TPM1-203ENST00000317516 RRP1BQ14684 758 aaKnown RBP21.54■■□□□ 1.04
TPM1-203ENST00000317516 SLC4A8Q2Y0W8 1093 aa21.54■■□□□ 1.04
TPM1-203ENST00000317516 POTEFA5A3E0 1075 aa21.53■■□□□ 1.04
TPM1-203ENST00000317516 GOLIM4O00461 696 aa21.53■■□□□ 1.04
TPM1-203ENST00000317516 HMGCS2P54868 508 aa21.53■■□□□ 1.04
TPM1-203ENST00000317516 SH3D19Q5HYK7 790 aa21.53■■□□□ 1.04
TPM1-203ENST00000317516 LRRCC1Q9C099 1032 aa21.53■■□□□ 1.04
TPM1-203ENST00000317516 TMOD4Q9NZQ9 345 aa21.53■■□□□ 1.04
TPM1-203ENST00000317516 C19orf81C9J6K1 198 aa21.52■■□□□ 1.04
TPM1-203ENST00000317516 PDE6AP16499 860 aa21.52■■□□□ 1.04
TPM1-203ENST00000317516 ATP5JP18859 108 aa21.52■■□□□ 1.04
TPM1-203ENST00000317516 CTGFP29279 349 aa21.52■■□□□ 1.04
TPM1-203ENST00000317516 TREML2Q5T2D2 321 aa21.52■■□□□ 1.04
TPM1-203ENST00000317516 CRNKL1Q9BZJ0 848 aaKnown RBP21.52■■□□□ 1.04
TPM1-203ENST00000317516 DNAJC18Q9H819 358 aa21.52■■□□□ 1.04
TPM1-203ENST00000317516 SERPINB13Q9UIV8 391 aa21.52■■□□□ 1.04
TPM1-203ENST00000317516 MYPNQ86TC9 1320 aa21.52■■□□□ 1.03
TPM1-203ENST00000317516 GCLCP48506 637 aaPredicted RBP21.51■■□□□ 1.03
TPM1-203ENST00000317516 BACE1P56817 501 aa21.51■■□□□ 1.03
TPM1-203ENST00000317516 SH3TC2Q8TF17 1288 aa21.51■■□□□ 1.03
TPM1-203ENST00000317516 RIOK1Q9BRS2 568 aaKnown RBP21.51■■□□□ 1.03
TPM1-203ENST00000317516 EHD4Q9H223 541 aa21.51■■□□□ 1.03
TPM1-203ENST00000317516 BOLA2Q9H3K6 86 aa21.51■■□□□ 1.03
TPM1-203ENST00000317516 USP17L10C9JJH3 530 aa21.5■■□□□ 1.03
TPM1-203ENST00000317516 GDF11O95390 407 aa21.5■■□□□ 1.03
TPM1-203ENST00000317516 GRK4P32298 578 aa21.5■■□□□ 1.03
TPM1-203ENST00000317516 ANKRD13CQ8N6S4 541 aa21.5■■□□□ 1.03
TPM1-203ENST00000317516 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.5■■□□□ 1.03
TPM1-203ENST00000317516 PAG1Q9NWQ8 432 aa21.5■■□□□ 1.03
TPM1-203ENST00000317516 ZBTB21Q9ULJ3 1066 aa21.5■■□□□ 1.03
TPM1-203ENST00000317516 ZNF532Q9HCE3 1301 aa21.5■■□□□ 1.03
TPM1-203ENST00000317516 TNPO2O14787 897 aaKnown RBP21.49■■□□□ 1.03
TPM1-203ENST00000317516 POLR3DP05423 398 aaPredicted RBP21.49■■□□□ 1.03
TPM1-203ENST00000317516 EN2P19622 333 aaPredicted RBP21.49■■□□□ 1.03
TPM1-203ENST00000317516 MTMR2Q13614 643 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms