RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 FKBP15Q5T1M5 1219 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 TEX11Q8IYF3 940 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 OVOS2A0A0G2JMS6 1433 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 PLCG2P16885 1265 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 HMGB2P26583 209 aaKnown RBP15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 AMPD3Q01432 767 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 TMCO3Q6UWJ1 677 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 PLIN2Q99541 437 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 A0A1W2PQD8 194 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 GOLGA6L9A6NEM1 432 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 SH2B2O14492 632 aaPredicted RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 KIF23Q02241 960 aaPredicted RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 LINC00301Q8NCQ3 95 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 PGBD1Q96JS3 809 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 CTAGE1Q96RT6 745 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 XPO4Q9C0E2 1151 aaKnown RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 ZSWIM5Q9P217 1185 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 CDHR2Q9BYE9 1310 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 ERFEQ4G0M1 354 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 TTC38Q5R3I4 469 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 ZNF397Q8NF99 534 aaPredicted RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 POLR3EQ9NVU0 708 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 C11orf57Q6ZUT1 292 aaPredicted RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 ZSCAN10Q96SZ4 725 aaPredicted RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 ALDH8A1Q9H2A2 487 aaPredicted RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 PALLDQ8WX93 1383 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 POSTNQ15063 836 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 DTHD1Q6ZMT9 781 aa15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 TDRD7Q8NHU6 1098 aaKnown RBP15.25■□□□□ 0.03
PCDHB9-201ENST00000316105 DLG5Q8TDM6 1919 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 TFAP4Q01664 338 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 C6orf50Q9HD87 102 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 EXOC1Q9NV70 894 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 NRBP1Q9UHY1 535 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 SLC39A14Q15043 492 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 SYT10Q6XYQ8 523 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 TBC1D10CQ8IV04 446 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 PYCARDQ9ULZ3 195 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 NFE2L3Q9Y4A8 694 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 CCDC66A2RUB6 948 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 SPAG1Q07617 926 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 PDLIM2Q96JY6 352 aa15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
PCDHB9-201ENST00000316105 KNDC1Q76NI1 1749 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 MAPKAPK5Q8IW41 473 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 MYRIPQ8NFW9 859 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 RRP36Q96EU6 259 aaKnown RBP15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 SERTAD1Q9UHV2 236 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 NRXN3Q9Y4C0 1643 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 DYNLL1P63167 89 aaKnown RBP15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 ASIC1P78348 528 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 STAMQ92783 540 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 ZSWIM4Q9H7M6 989 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 PPP1R1BQ9UD71 204 aaPredicted RBP15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 USP21Q9UK80 565 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 INCENPQ9NQS7 918 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 PSMA7O14818 248 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 ERLIN1O75477 346 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 TERF1P54274 439 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 RUFY1Q96T51 708 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 TSG101Q99816 390 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 LUC7LQ9NQ29 371 aaKnown RBP15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 GGA1Q9UJY5 639 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 RIPOR2Q9Y4F9 1068 aa15.23■□□□□ 0.03
PCDHB9-201ENST00000316105 MLKLQ8NB16 471 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 TGFBRAP1Q8WUH2 860 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 BBXQ8WY36 941 aaPredicted RBP15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 SLU7O95391 586 aaKnown RBP15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 SPA17Q15506 151 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 DPCR1Q3MIW9 517 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 TSC1Q92574 1164 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 PARP1P09874 1014 aaKnown RBP15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 LETM2Q2VYF4 491 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 SMARCC2Q8TAQ2 1214 aa15.22■□□□□ 0.03
PCDHB9-201ENST00000316105 GNA11P29992 359 aa15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 CCDC181Q5TID7 509 aa15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 MRFAP1L1Q96HT8 127 aa15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 ARPP21Q9UBL0 812 aaPredicted RBP15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 RBM17Q96I25 401 aaKnown RBP15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 MST1RQ04912 1400 aa15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 AKAP12Q02952 1782 aa15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 TRIM21P19474 475 aaKnown RBP15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 IMPACTQ9P2X3 320 aa15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.21■□□□□ 0.03
PCDHB9-201ENST00000316105 FGFR1OPO95684 399 aaKnown RBP15.2■□□□□ 0.02
PCDHB9-201ENST00000316105 TNNI2P48788 182 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms