RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SERTAD1Q9UHV2 236 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 MYH7P12883 1935 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
SKA3-202ENST00000314759 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 GRAMD1CQ8IYS0 662 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 SYNE4Q8N205 404 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 MLKLQ8NB16 471 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 DHX58Q96C10 678 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 SAMSN1Q9NSI8 373 aaKnown RBP15.37■□□□□ 0.05
SKA3-202ENST00000314759 HOOK1Q9UJC3 728 aaKnown RBP15.37■□□□□ 0.05
SKA3-202ENST00000314759 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
SKA3-202ENST00000314759 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
SKA3-202ENST00000314759 ZNF532Q9HCE3 1301 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 RIC1Q4ADV7 1423 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 PTPREP23469 700 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 MORC3Q14149 939 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 UBE3CQ15386 1083 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 ZFP91Q96JP5 570 aaPredicted RBP15.37■□□□□ 0.05
SKA3-202ENST00000314759 AKAP11Q9UKA4 1901 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 KCPQ6ZWJ8 1503 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
SKA3-202ENST00000314759 MTF1Q14872 753 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 KARSQ15046 597 aaKnown RBP15.36■□□□□ 0.05
SKA3-202ENST00000314759 PLA2G12BQ9BX93 195 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 FUT8Q9BYC5 575 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 IRX2Q9BZI1 471 aaPredicted RBP15.36■□□□□ 0.05
SKA3-202ENST00000314759 MRPL44Q9H9J2 332 aaKnown RBP15.36■□□□□ 0.05
SKA3-202ENST00000314759 ZSWIM5Q9P217 1185 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 ATRNO75882 1429 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 ERVV-2B6SEH9 535 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 H3BQF6 201 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 FMNL1O95466 1100 aaPredicted RBP15.36■□□□□ 0.05
SKA3-202ENST00000314759 MMP1P03956 469 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 NR1I3Q14994 352 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 LDHAL6AQ6ZMR3 332 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 RABGGTAQ92696 567 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 TSPYL1Q9H0U9 437 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 SEC31BQ9NQW1 1179 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 RAI14Q9P0K7 980 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 KCNJ14Q9UNX9 436 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 SLC12A7Q9Y666 1083 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 STK36Q9NRP7 1315 aa15.36■□□□□ 0.05
SKA3-202ENST00000314759 TRIM28Q13263 835 aaKnown RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 DIS3L2Q8IYB7 885 aaKnown RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 C10orf67Q8IYJ2 551 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 STRBPQ96SI9 672 aaKnown RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 WWC3Q9ULE0 1092 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 MAP3K15Q6ZN16 1313 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 ECM29Q5VYK3 1845 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 PDE6AP16499 860 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 LIFRP42702 1097 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 TTF1Q15361 905 aaPredicted RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 CERS3Q8IU89 383 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 ZBTB38Q8NAP3 1195 aaPredicted RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 ZCRB1Q8TBF4 217 aaKnown RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 TEX13AQ9BXU3 409 aaPredicted RBP15.35■□□□□ 0.05
SKA3-202ENST00000314759 TACC3Q9Y6A5 838 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
SKA3-202ENST00000314759 IFIT3O14879 490 aaKnown RBP15.34■□□□□ 0.05
SKA3-202ENST00000314759 IFNAR1P17181 557 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 CCDC12Q8WUD4 166 aaPredicted RBP15.34■□□□□ 0.05
SKA3-202ENST00000314759 ZNF512BQ96KM6 892 aaPredicted RBP15.34■□□□□ 0.05
SKA3-202ENST00000314759 ZSWIM4Q9H7M6 989 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 ADAM21Q9UKJ8 722 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 TCRBV5S4A2TA0A5A2 114 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 SOWAHDA6NJG2 315 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 ITGA6P23229 1130 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 LMAN1P49257 510 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 CTDSPL2Q05D32 466 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 USP49Q70CQ1 688 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 GOLGA1Q92805 767 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 PCDH11XQ9BZA7 1347 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 PCDH11YQ9BZA8 1340 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 GREM2Q9H772 168 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 RSPH14Q9UHP6 348 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 PCDHB6Q9Y5E3 794 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
SKA3-202ENST00000314759 PARP4Q9UKK3 1724 aaKnown RBP15.34■□□□□ 0.05
SKA3-202ENST00000314759 MYO1CO00159 1063 aa15.33■□□□□ 0.05
SKA3-202ENST00000314759 ACTN4O43707 911 aaKnown RBP15.33■□□□□ 0.05
SKA3-202ENST00000314759 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.05
SKA3-202ENST00000314759 A0A1B0GTH6 734 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 TEX33O43247 280 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 TXLNAP40222 546 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 GPS2Q13227 327 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 NR5A1Q13285 461 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 SAFBQ15424 915 aaKnown RBP eCLIP15.33■□□□□ 0.04
SKA3-202ENST00000314759 RILPL1Q5EBL4 403 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 VGLL2Q8N8G2 317 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 TRIML1Q8N9V2 468 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 TTLL11Q8NHH1 800 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 AIDAQ96BJ3 306 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 EPB41L4AQ9HCS5 686 aaPredicted RBP15.33■□□□□ 0.04
SKA3-202ENST00000314759 A0A0U1RQJ8 604 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 CCDC175P0C221 793 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 PHKA1P46020 1223 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms