RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MS4A4AQ96JQ5 239 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 FAM227BQ96M60 508 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.56□□□□□ -0.085e-6■■■□□ 17
SCFD1-201ENST00000311943 DCP1AQ9NPI6 582 aaPredicted RBP14.56□□□□□ -0.08
SCFD1-201ENST00000311943 RNF186Q9NXI6 227 aa14.56□□□□□ -0.08
SCFD1-201ENST00000311943 ZBTB47Q9UFB7 747 aaPredicted RBP14.56□□□□□ -0.08
SCFD1-201ENST00000311943 ECM2O94769 699 aaPredicted RBP14.55□□□□□ -0.08
SCFD1-201ENST00000311943 RILPL2Q969X0 211 aa14.55□□□□□ -0.08
SCFD1-201ENST00000311943 FOXP2O15409 715 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 RNF113AO15541 343 aaKnown RBP14.54□□□□□ -0.08
SCFD1-201ENST00000311943 HSPA8P11142 646 aaKnown RBP14.54□□□□□ -0.08
SCFD1-201ENST00000311943 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
SCFD1-201ENST00000311943 MAP3K10Q02779 954 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 UBE3CQ15386 1083 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 IL25Q9H293 177 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 MCM9Q9NXL9 1143 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 MYH1P12882 1939 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 ERC2O15083 957 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 VPS53Q5VIR6 699 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 BRI3BPQ8WY22 251 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 STRBPQ96SI9 672 aaKnown RBP14.54□□□□□ -0.08
SCFD1-201ENST00000311943 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.54□□□□□ -0.083e-9■■□□□ 13.6
SCFD1-201ENST00000311943 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
SCFD1-201ENST00000311943 CSADQ9Y600 493 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 SLC4A4Q9Y6R1 1079 aa14.54□□□□□ -0.08
SCFD1-201ENST00000311943 SPDYE5A6NIY4 337 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 MAP2K1Q02750 393 aaPredicted RBP14.53□□□□□ -0.08
SCFD1-201ENST00000311943 DCAF15Q66K64 600 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 DDX60LQ5H9U9 1706 aaKnown RBP14.53□□□□□ -0.08
SCFD1-201ENST00000311943 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 GPAA1O43292 621 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 PLCG2P16885 1265 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 CAP1Q01518 475 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 CLEC10AQ8IUN9 316 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 PI4KBQ9UBF8 816 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 ZHX2Q9Y6X8 837 aa14.53□□□□□ -0.08
SCFD1-201ENST00000311943 GSG1L2A8MUP6 293 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 USP17L12C9JPN9 530 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 USP17L21D6R901 530 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
SCFD1-201ENST00000311943 PTPRAP18433 802 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 APPBP2Q92624 585 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 CRNKL1Q9BZJ0 848 aaKnown RBP14.52□□□□□ -0.09
SCFD1-201ENST00000311943 INCENPQ9NQS7 918 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 BRCA2P51587 3418 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 HTTP42858 3142 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 CASP8AP2Q9UKL3 1982 aa14.52□□□□□ -0.09
SCFD1-201ENST00000311943 ZNF589Q86UQ0 364 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-201ENST00000311943 SCYL3Q8IZE3 742 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 NAV1Q8NEY1 1877 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 TRIM75PA6NK02 468 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 POLR3DP05423 398 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-201ENST00000311943 TM4SF4P48230 202 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 NMIQ13287 307 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-201ENST00000311943 MOGSQ13724 837 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 ZMYM1Q5SVZ6 1142 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 CTR9Q6PD62 1173 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 ERO1BQ86YB8 467 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
SCFD1-201ENST00000311943 CRACR2BQ8N4Y2 399 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-201ENST00000311943 CCL15-CCL14A0A0B4J2E2 113 aa14.5□□□□□ -0.09
SCFD1-201ENST00000311943 SHMT1P34896 483 aa14.5□□□□□ -0.09
SCFD1-201ENST00000311943 CAP2P40123 477 aa14.5□□□□□ -0.09
SCFD1-201ENST00000311943 CCL15Q16663 113 aa14.5□□□□□ -0.09
SCFD1-201ENST00000311943 NKX2-3Q8TAU0 364 aa14.5□□□□□ -0.09
SCFD1-201ENST00000311943 TACC3Q9Y6A5 838 aa14.5□□□□□ -0.09
SCFD1-201ENST00000311943 TBC1D12O60347 775 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 PEX10O60683 326 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 ZBTB48P10074 688 aaPredicted RBP14.49□□□□□ -0.09
SCFD1-201ENST00000311943 EVI5LQ96CN4 794 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 OSBPL3Q9H4L5 887 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 PHIPQ8WWQ0 1821 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 COL2A1P02458 1487 aaPredicted RBP14.49□□□□□ -0.09
SCFD1-201ENST00000311943 BTBD19C9JJ37 291 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 GABPAQ06546 454 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 SPP2Q13103 211 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 NOL9Q5SY16 702 aaKnown RBP14.49□□□□□ -0.09
SCFD1-201ENST00000311943 METTL16Q86W50 562 aaKnown RBP14.49□□□□□ -0.09
SCFD1-201ENST00000311943 BEGAINQ9BUH8 593 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 DHX36Q9H2U1 1008 aaKnown RBP14.49□□□□□ -0.09
SCFD1-201ENST00000311943 SERPINB13Q9UIV8 391 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 ATAD5Q96QE3 1844 aa14.49□□□□□ -0.09
SCFD1-201ENST00000311943 CTNND1O60716 968 aaKnown RBP14.48□□□□□ -0.09
SCFD1-201ENST00000311943 GH2P01242 217 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 APPP05067 770 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 SDSP20132 328 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 ZSCAN25Q6NSZ9 544 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 DOCK1Q14185 1865 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 MINDY4BA8MYZ0 360 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 PRDM1O75626 825 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 CRHR2Q13324 411 aa14.48□□□□□ -0.09
SCFD1-201ENST00000311943 ZYXQ15942 572 aaKnown RBP14.48□□□□□ -0.09
SCFD1-201ENST00000311943 FOXP4Q8IVH2 680 aaPredicted RBP14.48□□□□□ -0.09
SCFD1-201ENST00000311943 MANSC4A6NHS7 340 aaPredicted RBP14.47□□□□□ -0.09
SCFD1-201ENST00000311943 HLA-DOAP06340 250 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms