RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 C2CD5Q86YS7 1000 aa24.79■■□□□ 1.56
ATG4D-201ENST00000309469 CERS3Q8IU89 383 aa24.79■■□□□ 1.56
ATG4D-201ENST00000309469 PHKBQ93100 1093 aa24.79■■□□□ 1.56
ATG4D-201ENST00000309469 ZNF622Q969S3 477 aaKnown RBP eCLIP24.79■■□□□ 1.56
ATG4D-201ENST00000309469 BAZ2AQ9UIF9 1905 aaKnown RBP24.79■■□□□ 1.56
ATG4D-201ENST00000309469 ZNF654Q8IZM8 581 aa24.78■■□□□ 1.56
ATG4D-201ENST00000309469 ALG1Q9BT22 464 aa24.78■■□□□ 1.56
ATG4D-201ENST00000309469 USP17L8P0C7I0 530 aa24.78■■□□□ 1.56
ATG4D-201ENST00000309469 RTN1Q16799 776 aa24.78■■□□□ 1.56
ATG4D-201ENST00000309469 ILDR1Q86SU0 546 aaPredicted RBP24.78■■□□□ 1.56
ATG4D-201ENST00000309469 IQCA1Q86XH1 822 aa24.78■■□□□ 1.56
ATG4D-201ENST00000309469 ZNF396Q96N95 335 aaPredicted RBP24.78■■□□□ 1.56
ATG4D-201ENST00000309469 PANK2Q9BZ23 570 aa24.78■■□□□ 1.56
ATG4D-201ENST00000309469 GPR75-ASB3A0A0A6YYF3 556 aa24.77■■□□□ 1.56
ATG4D-201ENST00000309469 GTF2IP78347 998 aa24.77■■□□□ 1.56
ATG4D-201ENST00000309469 C12orf60Q5U649 245 aa24.77■■□□□ 1.56
ATG4D-201ENST00000309469 SLF2Q8IX21 1173 aa24.77■■□□□ 1.56
ATG4D-201ENST00000309469 ENAHQ8N8S7 591 aaPredicted RBP24.77■■□□□ 1.56
ATG4D-201ENST00000309469 FAM163AQ96GL9 167 aaPredicted RBP24.77■■□□□ 1.56
ATG4D-201ENST00000309469 COL11A2P13942 1736 aaPredicted RBP24.77■■□□□ 1.56
ATG4D-201ENST00000309469 H0YIN7 160 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 IFNAR1P17181 557 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 BTDP43251 543 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 PDE4BQ07343 736 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 GJB4Q9NTQ9 266 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 STK36Q9NRP7 1315 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 CCDC196A0A1B0GTZ2 297 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 SSRP1Q08945 709 aaKnown RBP24.76■■□□□ 1.55
ATG4D-201ENST00000309469 STYK1Q6J9G0 422 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 FANCBQ8NB91 859 aa24.76■■□□□ 1.55
ATG4D-201ENST00000309469 GOLGA6L4A6NEF3 574 aa24.75■■□□□ 1.55
ATG4D-201ENST00000309469 LETM1O95202 739 aaPredicted RBP24.75■■□□□ 1.55
ATG4D-201ENST00000309469 FMNL1O95466 1100 aaPredicted RBP24.75■■□□□ 1.55
ATG4D-201ENST00000309469 TGFBRAP1Q8WUH2 860 aa24.75■■□□□ 1.55
ATG4D-201ENST00000309469 AIFM3Q96NN9 605 aa24.75■■□□□ 1.55
ATG4D-201ENST00000309469 RCOR1Q9UKL0 485 aa24.75■■□□□ 1.55
ATG4D-201ENST00000309469 IFIT1BQ5T764 474 aaKnown RBP24.74■■□□□ 1.55
ATG4D-201ENST00000309469 NUP133Q8WUM0 1156 aa24.74■■□□□ 1.55
ATG4D-201ENST00000309469 SLC26A6Q9BXS9 759 aa24.74■■□□□ 1.55
ATG4D-201ENST00000309469 CEBPZQ03701 1054 aaKnown RBP24.74■■□□□ 1.55
ATG4D-201ENST00000309469 PPP2R5BQ15173 497 aa24.74■■□□□ 1.55
ATG4D-201ENST00000309469 PGBD1Q96JS3 809 aa24.74■■□□□ 1.55
ATG4D-201ENST00000309469 USP28Q96RU2 1077 aa24.74■■□□□ 1.55
ATG4D-201ENST00000309469 PLCG2P16885 1265 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 BRAPQ7Z569 592 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 AMOTL1Q8IY63 956 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 RBSNQ9H1K0 784 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 SUGT1Q9Y2Z0 365 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 LAMB1P07942 1786 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 GAKO14976 1311 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 KIF23Q02241 960 aaPredicted RBP24.73■■□□□ 1.55
ATG4D-201ENST00000309469 FAM47AQ5JRC9 791 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 CATIPQ7Z7H3 387 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 EYA3Q99504 573 aa24.73■■□□□ 1.55
ATG4D-201ENST00000309469 NT5C2P49902 561 aa24.72■■□□□ 1.55
ATG4D-201ENST00000309469 DOK7Q18PE1 504 aa24.72■■□□□ 1.55
ATG4D-201ENST00000309469 SLC4A8Q2Y0W8 1093 aa24.72■■□□□ 1.55
ATG4D-201ENST00000309469 KRT40Q6A162 431 aa24.72■■□□□ 1.55
ATG4D-201ENST00000309469 NBPF11Q86T75 865 aa24.72■■□□□ 1.55
ATG4D-201ENST00000309469 TRIM22Q8IYM9 498 aa24.72■■□□□ 1.55
ATG4D-201ENST00000309469 CRACR2BQ8N4Y2 399 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-201ENST00000309469 WASF1Q92558 559 aa24.72■■□□□ 1.55
ATG4D-201ENST00000309469 FTOQ9C0B1 505 aaKnown RBP eCLIP24.72■■□□□ 1.55
ATG4D-201ENST00000309469 MAPKAPK5Q8IW41 473 aa24.71■■□□□ 1.55
ATG4D-201ENST00000309469 TEX11Q8IYF3 940 aa24.71■■□□□ 1.55
ATG4D-201ENST00000309469 ROBO3Q96MS0 1386 aa24.71■■□□□ 1.55
ATG4D-201ENST00000309469 POLR3DP05423 398 aaPredicted RBP24.71■■□□□ 1.55
ATG4D-201ENST00000309469 LIG1P18858 919 aa24.71■■□□□ 1.55
ATG4D-201ENST00000309469 NASPP49321 788 aaPredicted RBP24.71■■□□□ 1.55
ATG4D-201ENST00000309469 TRIM29Q14134 588 aa24.71■■□□□ 1.55
ATG4D-201ENST00000309469 FBXW7Q969H0 707 aa24.71■■□□□ 1.55
ATG4D-201ENST00000309469 TSPY2A6NKD2 308 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 KIF28PB7ZC32 967 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 G3V3G9 751 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 RHBDL3P58872 404 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 DCAF8Q5TAQ9 597 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 FBXO41Q8TF61 875 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 DYNLL2Q96FJ2 89 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 TSPY26PQ9H489 355 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 RTEL1Q9NZ71 1219 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 MYH2Q9UKX2 1941 aa24.7■■□□□ 1.54
ATG4D-201ENST00000309469 CALM1P0DP23 149 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 CALM2P0DP24 149 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 CALM3P0DP25 149 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 CHRNA5P30532 468 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 KLHL34Q8N239 644 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 UBE2Q2LH0YL09 131 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 NMT2O60551 498 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 TROAPQ12815 778 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 MYSM1Q5VVJ2 828 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 CMTR1Q8N1G2 835 aaKnown RBP24.69■■□□□ 1.54
ATG4D-201ENST00000309469 CERS5Q8N5B7 392 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 CNKSR1Q969H4 720 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 SAP30BPQ9UHR5 308 aaKnown RBP24.69■■□□□ 1.54
ATG4D-201ENST00000309469 DAGLAQ9Y4D2 1042 aa24.69■■□□□ 1.54
ATG4D-201ENST00000309469 DDAH1O94760 285 aa24.68■■□□□ 1.54
ATG4D-201ENST00000309469 DEXIO95424 95 aa24.68■■□□□ 1.54
ATG4D-201ENST00000309469 PLCD1P51178 756 aa24.68■■□□□ 1.54
ATG4D-201ENST00000309469 SF3B2Q13435 895 aaKnown RBP24.68■■□□□ 1.54
ATG4D-201ENST00000309469 CCDC82Q8N4S0 544 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms