RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 SMC6Q96SB8 1091 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 ZNF830Q96NB3 372 aaPredicted RBP23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 IFNKQ9P0W0 207 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 LRWD1Q9UFC0 647 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 ZNF532Q9HCE3 1301 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 MFSD14BQ5SR56 506 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 CNGA4Q8IV77 575 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 CETN3O15182 167 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 TNNC1P63316 161 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 BIRC2Q13490 618 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 DCAF15Q66K64 600 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 CHURC1Q8WUH1 139 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 FAM47CQ5HY64 1035 aa23.18■■□□□ 1.3
SH3RF3-201ENST00000309415 A0A1B0GVL5 298 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 ZBTB24O43167 697 aaPredicted RBP23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 KRT19P08727 400 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 GTF2F1P35269 517 aaKnown RBP eCLIP23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 MYCT1Q8N699 235 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 LZTFL1Q9NQ48 299 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 STK10O94804 968 aaKnown RBP23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 TUBB4AP04350 444 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 KARSQ15046 597 aaKnown RBP23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 USP19O94966 1318 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 PABPC4Q13310 644 aaKnown RBP eCLIP23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 KMT5BQ4FZB7 885 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 RLBP1P12271 317 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 CALCRLQ16602 461 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 GLG1Q92896 1179 aa23.17■■□□□ 1.3
SH3RF3-201ENST00000309415 CFAP157Q5JU67 520 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 ZNF569Q5MCW4 686 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 SMIM23A6NLE4 172 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 CCT6BQ92526 530 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 ARFGAP3Q9NP61 516 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 ERCC5P28715 1186 aaPredicted RBP23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 ZAP70P43403 619 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 PPP2R5BQ15173 497 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 ARPP21Q9UBL0 812 aaPredicted RBP23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 TFAP4Q01664 338 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 CCDC6Q16204 474 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 PPP1R21Q6ZMI0 780 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 GADL1Q6ZQY3 521 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 ATP2B4P23634 1241 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 CTSWP56202 376 aa23.16■■□□□ 1.3
SH3RF3-201ENST00000309415 CRCPO75575 148 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 PRPF6O94906 941 aaKnown RBP23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 CPA1P15085 419 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 TBC1D8BQ0IIM8 1120 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 ANO1Q5XXA6 986 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 IFT81Q8WYA0 676 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 ZNF496Q96IT1 587 aaPredicted RBP23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 MYL5Q02045 173 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 GNPTABQ3T906 1256 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 KBTBD3Q8NAB2 608 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 SMC1BQ8NDV3 1235 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 RRP9O43818 475 aaKnown RBP23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 ASIC2Q16515 512 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 ALDH3A1P30838 453 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 GABPAQ06546 454 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 SULF1Q8IWU6 871 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 SRRTQ9BXP5 876 aaKnown RBP23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 MLXIPQ9HAP2 919 aa23.15■■□□□ 1.3
SH3RF3-201ENST00000309415 PTPRKQ15262 1439 aa23.14■■□□□ 1.3
SH3RF3-201ENST00000309415 DIS3L2Q8IYB7 885 aaKnown RBP23.14■■□□□ 1.3
SH3RF3-201ENST00000309415 LLPHQ9BRT6 129 aaKnown RBP23.14■■□□□ 1.3
SH3RF3-201ENST00000309415 CNGA1P29973 690 aa23.14■■□□□ 1.3
SH3RF3-201ENST00000309415 ANAPC4Q9UJX5 808 aa23.14■■□□□ 1.3
SH3RF3-201ENST00000309415 ARHGEF16Q5VV41 709 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 OTUD6AQ7L8S5 288 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 NSMCE1Q8WV22 266 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 USP26Q9BXU7 913 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 TCP10L2B9ZVM9 353 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 SPATA24Q86W54 205 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 CCDC125Q86Z20 511 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 PRIMPOLQ96LW4 560 aa23.14■■□□□ 1.29
SH3RF3-201ENST00000309415 FAM160A1Q05DH4 1040 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 TESK2Q96S53 571 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 KCNH3Q9ULD8 1083 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 ZBTB7BO15156 539 aaPredicted RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 ARID4AP29374 1257 aaPredicted RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 GABPB2Q8TAK5 448 aaPredicted RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 CNKSR1Q969H4 720 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 HAUS2Q9NVX0 235 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 AOX1Q06278 1338 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 AKR1B15C9JRZ8 316 aaPredicted RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 HERC4Q5GLZ8 1057 aaPredicted RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 NAP1L3Q99457 506 aaPredicted RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 QTRT2Q9H974 415 aaKnown RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 KCNG1Q9UIX4 513 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 HSPA4P34932 840 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 UIMC1Q96RL1 719 aa23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 GPR161Q8N6U8 529 aaKnown RBP23.13■■□□□ 1.29
SH3RF3-201ENST00000309415 FAM47AQ5JRC9 791 aa23.12■■□□□ 1.29
SH3RF3-201ENST00000309415 CCDC122Q5T0U0 273 aa23.12■■□□□ 1.29
SH3RF3-201ENST00000309415 CSGALNACT2Q8N6G5 542 aa23.12■■□□□ 1.29
SH3RF3-201ENST00000309415 TRPC5Q9UL62 973 aaPredicted RBP23.12■■□□□ 1.29
SH3RF3-201ENST00000309415 EXOC3O60645 756 aa23.12■■□□□ 1.29
SH3RF3-201ENST00000309415 EP400NLQ6ZTU2 488 aa23.12■■□□□ 1.29
SH3RF3-201ENST00000309415 MYL10Q9BUA6 226 aa23.12■■□□□ 1.29
SH3RF3-201ENST00000309415 WDR62O43379 1518 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms