RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 TIGD1Q96MW7 591 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 GPR101Q96P66 508 aaPredicted RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 TSPYL1Q9H0U9 437 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 KCND1Q9NSA2 647 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 ARHGEF10O15013 1369 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 CCDC172P0C7W6 258 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
MMP3-201ENST00000299855 MAP3K11Q16584 847 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 LMBRD2Q68DH5 695 aaPredicted RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 ZNF772Q68DY9 489 aaPredicted RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 APPL2Q8NEU8 664 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 TAF4BQ92750 862 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 TBC1D31Q96DN5 1066 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 ALG2Q9H553 416 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 DCAF16Q9NXF7 216 aa10.43□□□□□ -0.74
MMP3-201ENST00000299855 XPO7Q9UIA9 1087 aaKnown RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.43□□□□□ -0.74
MMP3-201ENST00000299855 KLHL33A6NCF5 533 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 LILRB3O75022 631 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 GNAI3P08754 354 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 NDUFV2P19404 249 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 PTGS1P23219 599 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 OAS2P29728 719 aaKnown RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 ATP8B2P98198 1209 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 NFX1Q12986 1120 aaKnown RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 HIC1Q14526 733 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 ZCCHC8Q6NZY4 707 aaKnown RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 PDXDC2PQ6P474 469 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 RBM43Q6ZSC3 357 aaKnown RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 CCDC186Q7Z3E2 898 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 DAAM2Q86T65 1068 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 SPC24Q8NBT2 197 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 MNS1Q8NEH6 495 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 ZFPM2Q8WW38 1151 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 SKA1Q96BD8 255 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 TBC1D20Q96BZ9 403 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 UPF3BQ9BZI7 483 aaKnown RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.42□□□□□ -0.74
MMP3-201ENST00000299855 C12orf49Q9H741 205 aa10.42□□□□□ -0.74
MMP3-201ENST00000299855 SH2B1Q9NRF2 756 aaPredicted RBP10.42□□□□□ -0.74
MMP3-201ENST00000299855 KIF2AO00139 706 aaPredicted RBP10.41□□□□□ -0.74
MMP3-201ENST00000299855 RBM6P78332 1123 aaKnown RBP10.41□□□□□ -0.74
MMP3-201ENST00000299855 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 ZSCAN25Q6NSZ9 544 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 MCF2L2Q86YR7 1114 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 TDRD7Q8NHU6 1098 aaKnown RBP10.41□□□□□ -0.74
MMP3-201ENST00000299855 RILPL2Q969X0 211 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 SELENOOQ9BVL4 669 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 CDK19Q9BWU1 502 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 CABP1Q9NZU7 370 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 GTF2A1LQ9UNN4 478 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 CACNA1FO60840 1977 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 RAD50Q92878 1312 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 SSTR3P32745 418 aaPredicted RBP10.41□□□□□ -0.74
MMP3-201ENST00000299855 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 ERO1AQ96HE7 468 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 TM6SF1Q9BZW5 370 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 TRIM6Q9C030 488 aaPredicted RBP10.41□□□□□ -0.74
MMP3-201ENST00000299855 NUP62CLQ9H1M0 184 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 DDX19AQ9NUU7 478 aaKnown RBP10.41□□□□□ -0.74
MMP3-201ENST00000299855 TAGLN3Q9UI15 199 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 MKL2Q9ULH7 1088 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 MTMR6Q9Y217 621 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 INPP5FQ9Y2H2 1132 aa10.41□□□□□ -0.74
MMP3-201ENST00000299855 TULP2O00295 520 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 TUBB4AP04350 444 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 ZNF75DP51815 510 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 AK2P54819 239 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 KRT85P78386 507 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 TYRO3Q06418 890 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 TSHZ3Q63HK5 1081 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 ERAP2Q6P179 960 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 CPLX2Q6PUV4 134 aaKnown RBP10.4□□□□□ -0.74
MMP3-201ENST00000299855 SNX32Q86XE0 403 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 CPXCR1Q8N123 301 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 BHMTQ93088 406 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
MMP3-201ENST00000299855 SNX14Q9Y5W7 946 aa10.4□□□□□ -0.74
MMP3-201ENST00000299855 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.75
MMP3-201ENST00000299855 SGSM2O43147 1006 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 TPD52L1Q16890 204 aaPredicted RBP10.4□□□□□ -0.75
MMP3-201ENST00000299855 VPS53Q5VIR6 699 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 CEP135Q66GS9 1140 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 TTLL5Q6EMB2 1281 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 SARM1Q6SZW1 724 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.75
MMP3-201ENST00000299855 PGBD3Q8N328 593 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 GIMAP1Q8WWP7 306 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 PGBD4Q96DM1 585 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 CDK5RAP3Q96JB5 506 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 C16orf45Q96MC5 204 aaPredicted RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms