RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DCAF5Q96JK2 942 aa15.16■□□□□ 0.02
CHRFAM7A-201ENST00000299847 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 ELF2Q15723 593 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 TTC38Q5R3I4 469 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 STRN3Q13033 797 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 PNOCQ13519 176 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 CYP26C1Q6V0L0 522 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 CCT6BQ92526 530 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 RIOK3O14730 519 aaKnown RBP15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 MYCT1Q8N699 235 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 CCDC26Q8TAB7 109 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 EYA3Q99504 573 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 GCNT3O95395 438 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 PAK1Q13153 545 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 UTP11Q9Y3A2 253 aaKnown RBP15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 SYCP2Q9BX26 1530 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 NKIRAS1Q9NYS0 192 aa15.15■□□□□ 0.02
CHRFAM7A-201ENST00000299847 PNMA6EA0A0J9YXQ4 647 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 MTX1Q13505 466 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TTC6Q86TZ1 520 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 AFAP1L1Q8TED9 768 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TMOD4Q9NZQ9 345 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 PLCD1P51178 756 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CCDC14Q49A88 953 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 FMNL3Q8IVF7 1028 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 MGARPQ8TDB4 240 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SNX29Q8TEQ0 813 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 EDC3Q96F86 508 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ARHGAP44Q17R89 818 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CFAP57Q96MR6 1250 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GTPBP4Q9BZE4 634 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF131P52739 623 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 VPS54Q9P1Q0 977 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NOP56O00567 594 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GAS8O95995 478 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NELFBQ8WX92 580 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NOD1Q9Y239 953 aa15.14■□□□□ 0.01
CHRFAM7A-201ENST00000299847 B4DLN1 442 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZAP70P43403 619 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 MRPL12P52815 198 aaKnown RBP15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 USP19O94966 1318 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 EYA2O00167 538 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SMTNP53814 917 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CEP104O60308 925 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TRIM6Q9C030 488 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 FRMPD2Q68DX3 1309 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TOM1O60784 492 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CIB2O75838 187 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CFBP00751 764 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF790Q6PG37 636 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 RPUSD2Q8IZ73 545 aaKnown RBP15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 STMN2Q93045 179 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SLF1Q9BQI6 1058 aa15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 METTL22Q9BUU2 404 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-201ENST00000299847 MAP3K19Q56UN5 1328 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF202O95125 648 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 GKAP1Q5VSY0 366 aaPredicted RBP15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 EPSTI1Q96J88 318 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 IFT74Q96LB3 600 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 MRPL44Q9H9J2 332 aaKnown RBP15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CTTNBP2NLQ9P2B4 639 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 UHRF1BP1LA0JNW5 1464 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 PRAG1Q86YV5 1406 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 NOL3O60936 208 aaKnown RBP15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 COBLO75128 1261 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 BSPRYQ5W0U4 402 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SECISBP2LQ93073 1101 aaKnown RBP15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 HINFPQ9BQA5 517 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF532Q9HCE3 1301 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CASC4Q6P4E1 433 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ARHGEF10LQ9HCE6 1279 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 TYW1BQ6NUM6 668 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 VPS52Q8N1B4 723 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ANO3Q9BYT9 981 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ASIC3Q9UHC3 531 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 CALCRLQ16602 461 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF75DP51815 510 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ADKP55263 362 aaKnown RBP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ITIH3Q06033 890 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 HERC4Q5GLZ8 1057 aaPredicted RBP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ANGEL1Q9UNK9 670 aaKnown RBP15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ADCY7P51828 1080 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 ZNF365Q70YC5 407 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 RAD50Q92878 1312 aa15.11■□□□□ 0.01
CHRFAM7A-201ENST00000299847 RILPL1Q5EBL4 403 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms