RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ARPP21Q9UBL0 812 aaPredicted RBP29.96■■■□□ 2.39
SDCCAG3-201ENST00000298537 FAM205AQ6ZU69 1335 aa29.96■■■□□ 2.39
SDCCAG3-201ENST00000298537 ZSCAN10Q96SZ4 725 aaPredicted RBP29.95■■■□□ 2.39
SDCCAG3-201ENST00000298537 ERICH2A1L162 156 aa29.95■■■□□ 2.38
SDCCAG3-201ENST00000298537 SBK1Q52WX2 424 aa29.95■■■□□ 2.38
SDCCAG3-201ENST00000298537 KIF3AQ9Y496 699 aa29.95■■■□□ 2.38
SDCCAG3-201ENST00000298537 BAG3O95817 575 aa29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 PLCD1P51178 756 aa29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 ZNF654Q8IZM8 581 aa29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 LEO1Q8WVC0 666 aaPredicted RBP29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 ZNF445P59923 1031 aa29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 SLC44A5Q8NCS7 719 aa29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 ZSCAN16Q9H4T2 348 aaPredicted RBP29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 GRPEL1Q9HAV7 217 aa29.94■■■□□ 2.38
SDCCAG3-201ENST00000298537 GPR75-ASB3A0A0A6YYF3 556 aa29.93■■■□□ 2.38
SDCCAG3-201ENST00000298537 GUCY1A2P33402 732 aa29.93■■■□□ 2.38
SDCCAG3-201ENST00000298537 C12orf60Q5U649 245 aa29.93■■■□□ 2.38
SDCCAG3-201ENST00000298537 FBXO18Q8NFZ0 1043 aa29.93■■■□□ 2.38
SDCCAG3-201ENST00000298537 LAMB1P07942 1786 aa29.93■■■□□ 2.38
SDCCAG3-201ENST00000298537 LDHCP07864 332 aa29.93■■■□□ 2.38
SDCCAG3-201ENST00000298537 SPATA32Q96LK8 384 aa29.93■■■□□ 2.38
SDCCAG3-201ENST00000298537 KIF28PB7ZC32 967 aa29.92■■■□□ 2.38
SDCCAG3-201ENST00000298537 RHBDL3P58872 404 aa29.92■■■□□ 2.38
SDCCAG3-201ENST00000298537 TMED8Q6PL24 325 aaPredicted RBP29.92■■■□□ 2.38
SDCCAG3-201ENST00000298537 CHMP4CQ96CF2 233 aa29.92■■■□□ 2.38
SDCCAG3-201ENST00000298537 ALG1Q9BT22 464 aa29.92■■■□□ 2.38
SDCCAG3-201ENST00000298537 BAG6P46379 1132 aa29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 STYK1Q6J9G0 422 aa29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 SLC26A6Q9BXS9 759 aa29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 DAGLAQ9Y4D2 1042 aa29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 ORC4O43929 436 aa29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 SYNE3Q6ZMZ3 975 aa29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 TBC1D22AQ8WUA7 517 aa29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 NOL10Q9BSC4 688 aaKnown RBP29.91■■■□□ 2.38
SDCCAG3-201ENST00000298537 POLR3DP05423 398 aaPredicted RBP29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 SF3B2Q13435 895 aaKnown RBP29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 RTN1Q16799 776 aa29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 USP28Q96RU2 1077 aa29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 IARSP41252 1262 aaKnown RBP29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 SCNN1DP51172 638 aa29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 L1TD1Q5T7N2 865 aaKnown RBP29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 TEX11Q8IYF3 940 aa29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 PGBD1Q96JS3 809 aa29.9■■■□□ 2.38
SDCCAG3-201ENST00000298537 GAKO14976 1311 aa29.89■■■□□ 2.38
SDCCAG3-201ENST00000298537 IFIT1BQ5T764 474 aaKnown RBP29.89■■■□□ 2.37
SDCCAG3-201ENST00000298537 FANCBQ8NB91 859 aa29.89■■■□□ 2.37
SDCCAG3-201ENST00000298537 TMX4Q9H1E5 349 aaPredicted RBP29.89■■■□□ 2.37
SDCCAG3-201ENST00000298537 MTA3Q9BTC8 594 aa29.88■■■□□ 2.37
SDCCAG3-201ENST00000298537 CDK5RAP2Q96SN8 1893 aa29.88■■■□□ 2.37
SDCCAG3-201ENST00000298537 ECM29Q5VYK3 1845 aa29.88■■■□□ 2.37
SDCCAG3-201ENST00000298537 LIG1P18858 919 aa29.88■■■□□ 2.37
SDCCAG3-201ENST00000298537 IQCA1Q86XH1 822 aa29.88■■■□□ 2.37
SDCCAG3-201ENST00000298537 C7orf43Q8WVR3 580 aa29.88■■■□□ 2.37
SDCCAG3-201ENST00000298537 SCAND2PQ9GZW5 306 aaPredicted RBP29.88■■■□□ 2.37
SDCCAG3-201ENST00000298537 CDKL5O76039 1030 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 CSPP1Q1MSJ5 1256 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 NBPF11Q86T75 865 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 FAM163AQ96GL9 167 aaPredicted RBP29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 TTF2Q9UNY4 1162 aaKnown RBP29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 NID2Q14112 1375 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 ELP1O95163 1332 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 FLT1P17948 1338 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 G3V3G9 751 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 DCAF8Q5TAQ9 597 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 TMTC2Q8N394 836 aa29.87■■■□□ 2.37
SDCCAG3-201ENST00000298537 ADAMTSL1Q8N6G6 1762 aa29.86■■■□□ 2.37
SDCCAG3-201ENST00000298537 TSPY2A6NKD2 308 aa29.86■■■□□ 2.37
SDCCAG3-201ENST00000298537 PCP11498 1178 aaKnown RBP29.86■■■□□ 2.37
SDCCAG3-201ENST00000298537 IFNAR1P17181 557 aa29.86■■■□□ 2.37
SDCCAG3-201ENST00000298537 MRE11P49959 708 aa29.86■■■□□ 2.37
SDCCAG3-201ENST00000298537 PDE4BQ07343 736 aa29.86■■■□□ 2.37
SDCCAG3-201ENST00000298537 CPLX2Q6PUV4 134 aaKnown RBP29.86■■■□□ 2.37
SDCCAG3-201ENST00000298537 NAV1Q8NEY1 1877 aa29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 KRT40Q6A162 431 aa29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 IL17RBQ9NRM6 502 aa29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 PCDHAC2Q9Y5I4 1007 aa29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 hCG_1642624A0A1W2PR95 340 aa29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 FMNL1O95466 1100 aaPredicted RBP29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 TFAP4Q01664 338 aa29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 KIF23Q02241 960 aaPredicted RBP29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 SSRP1Q08945 709 aaKnown RBP29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 RBSNQ9H1K0 784 aa29.85■■■□□ 2.37
SDCCAG3-201ENST00000298537 SLC3A2P08195 630 aaKnown RBP29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 TROAPQ12815 778 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 MYH15Q9Y2K3 1946 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 USP17L3A6NCW0 530 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 USP17L4A6NCW7 530 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 IGSF3O75054 1194 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 PLEKHA8P1O95397 391 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 AOC3Q16853 763 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 RCSD1Q6JBY9 416 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 USP17L1Q7RTZ2 530 aa29.84■■■□□ 2.37
SDCCAG3-201ENST00000298537 UTRNP46939 3433 aa29.83■■■□□ 2.37
SDCCAG3-201ENST00000298537 C21orf2O43822 256 aa29.83■■■□□ 2.37
SDCCAG3-201ENST00000298537 PICALMQ13492 652 aa29.83■■■□□ 2.37
SDCCAG3-201ENST00000298537 LRSAM1Q6UWE0 723 aa29.83■■■□□ 2.37
SDCCAG3-201ENST00000298537 CRACR2BQ8N4Y2 399 aaPredicted RBP29.83■■■□□ 2.37
SDCCAG3-201ENST00000298537 CNKSR1Q969H4 720 aa29.83■■■□□ 2.37
SDCCAG3-201ENST00000298537 EYA3Q99504 573 aa29.83■■■□□ 2.37
SDCCAG3-201ENST00000298537 QSER1Q2KHR3 1735 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms