RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 AFAP1L1Q8TED9 768 aa15.37■□□□□ 0.05
RPUSD4-201ENST00000298317 XAGE3Q8WTP9 111 aa15.37■□□□□ 0.05
RPUSD4-201ENST00000298317 NAPGQ99747 312 aaPredicted RBP15.37■□□□□ 0.05
RPUSD4-201ENST00000298317 DEF6Q9H4E7 631 aa15.37■□□□□ 0.05
RPUSD4-201ENST00000298317 ADAMTS7Q9UKP4 1686 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 A0A087WUV0 522 aaPredicted RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 RBL2Q08999 1139 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 IMMTQ16891 758 aaKnown RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 DNAJC21Q5F1R6 531 aaKnown RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 TTC39AQ5SRH9 613 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 MMS22LQ6ZRQ5 1243 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 NOA1Q8NC60 698 aaKnown RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 CTCFLQ8NI51 663 aaPredicted RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 TTF2Q9UNY4 1162 aaKnown RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 CCDC9Q9Y3X0 531 aaKnown RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 MFAP3LO75121 409 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 HAND2P61296 217 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 IGSF22Q8N9C0 903 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 OSBP2Q969R2 916 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 PLEKHA4Q9H4M7 779 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 GPR108Q9NPR9 543 aa15.36■□□□□ 0.05
RPUSD4-201ENST00000298317 ZMYM6O95789 1325 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 TEX33O43247 280 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 PLCD1P51178 756 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 EIF5P55010 431 aaKnown RBP15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 AMPD2Q01433 879 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 KRI1Q8N9T8 703 aaKnown RBP15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 CDC5LQ99459 802 aaKnown RBP15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 MYO1AQ9UBC5 1043 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 ZC3H4Q9UPT8 1303 aaKnown RBP15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 AFDNP55196 1824 aaKnown RBP15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 ERCC5P28715 1186 aaPredicted RBP15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 COPS6Q7L5N1 327 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 UBE3BQ7Z3V4 1068 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 PPFIBP1Q86W92 1011 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 NCOA7Q8NI08 942 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 LRRC59Q96AG4 307 aaKnown RBP15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 FAM107BQ9H098 131 aa15.35■□□□□ 0.05
RPUSD4-201ENST00000298317 SLIT3O75094 1523 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 MYL6BP14649 208 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 SLC9C2Q5TAH2 1124 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 MCTP2Q6DN12 878 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 ATG9AQ7Z3C6 839 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 CEP120Q8N960 986 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 NEUROD6Q96NK8 337 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 DONSONQ9NYP3 566 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 SHOX2O60902 331 aaPredicted RBP15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 CASP7P55210 303 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 GRIPAP1Q4V328 841 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 EGFL6Q8IUX8 553 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
RPUSD4-201ENST00000298317 CDKL5O76039 1030 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 ARHGAP25P42331 645 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 LRP10Q7Z4F1 713 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 STK11IPQ8N1F8 1099 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 HPCAL4Q9UM19 191 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 FGAP02671 866 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 IFIT1P09914 478 aaKnown RBP15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 SATB1Q01826 763 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 SART3Q15020 963 aaKnown RBP15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 RALYLQ86SE5 291 aaKnown RBP15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 CNGA4Q8IV77 575 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 ACRBPQ8NEB7 543 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 ADD3Q9UEY8 706 aaKnown RBP15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 TMEM94Q12767 1356 aa15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 KDM6AO15550 1401 aaPredicted RBP15.33■□□□□ 0.04
RPUSD4-201ENST00000298317 ABL1P00519 1130 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 TIMM10P62072 90 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 SPECC1Q5M775 1068 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 ANKRD13DQ6ZTN6 518 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 SERTAD1Q9UHV2 236 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 MYO6Q9UM54 1294 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 ITIH6Q6UXX5 1313 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 GYPCP04921 128 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 CCDC148Q8NFR7 591 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 WWC3Q9ULE0 1092 aa15.32■□□□□ 0.04
RPUSD4-201ENST00000298317 POLR2DO15514 142 aaKnown RBP15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 CASP14P31944 242 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 METAP2P50579 478 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 USP14P54578 494 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 NCAPH2Q6IBW4 605 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 CPLX3Q8WVH0 158 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 FBXO2Q9UK22 296 aaPredicted RBP15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 PTPREP23469 700 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 MCM3P25205 808 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 ERVK-24P63145 666 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 GRIN1Q05586 938 aa15.31■□□□□ 0.04
RPUSD4-201ENST00000298317 MAP9Q49MG5 647 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms