RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 CTNND1O60716 968 aaKnown RBP28.22■■■□□ 2.11
GBX1-201ENST00000297537 APPBP2Q92624 585 aa28.22■■■□□ 2.11
GBX1-201ENST00000297537 OSBP2Q969R2 916 aa28.22■■■□□ 2.11
GBX1-201ENST00000297537 MS4A4AQ96JQ5 239 aa28.22■■■□□ 2.11
GBX1-201ENST00000297537 DCP1AQ9NPI6 582 aaPredicted RBP28.22■■■□□ 2.11
GBX1-201ENST00000297537 SIPA1L1O43166 1804 aa28.22■■■□□ 2.11
GBX1-201ENST00000297537 LAMB1P07942 1786 aa28.22■■■□□ 2.11
GBX1-201ENST00000297537 TESPA1A2RU30 521 aaPredicted RBP28.21■■■□□ 2.11
GBX1-201ENST00000297537 CTCFP49711 727 aaPredicted RBP28.21■■■□□ 2.11
GBX1-201ENST00000297537 PPATQ06203 517 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 SREBF2Q12772 1141 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 SDR42E1Q8WUS8 393 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 EVI5LQ96CN4 794 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 OTUD5Q96G74 571 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 DNAJC18Q9H819 358 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 RNF186Q9NXI6 227 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 SAGE1Q9NXZ1 904 aa28.21■■■□□ 2.11
GBX1-201ENST00000297537 PRKAB2O43741 272 aa28.2■■■□□ 2.1
GBX1-201ENST00000297537 LRRFIP1Q32MZ4 808 aaKnown RBP28.2■■■□□ 2.1
GBX1-201ENST00000297537 SCYL3Q8IZE3 742 aa28.2■■■□□ 2.1
GBX1-201ENST00000297537 IRF6O14896 467 aa28.19■■■□□ 2.1
GBX1-201ENST00000297537 HLA-DOAP06340 250 aa28.19■■■□□ 2.1
GBX1-201ENST00000297537 HSPA8P11142 646 aaKnown RBP28.19■■■□□ 2.1
GBX1-201ENST00000297537 PPIL2Q13356 520 aa28.19■■■□□ 2.1
GBX1-201ENST00000297537 RRP1BQ14684 758 aaKnown RBP28.19■■■□□ 2.1
GBX1-201ENST00000297537 STRBPQ96SI9 672 aaKnown RBP28.19■■■□□ 2.1
GBX1-201ENST00000297537 FSD1Q9BTV5 496 aa28.19■■■□□ 2.1
GBX1-201ENST00000297537 ATP8A2Q9NTI2 1148 aa28.19■■■□□ 2.1
GBX1-201ENST00000297537 PDE4AP27815 886 aa28.18■■■□□ 2.1
GBX1-201ENST00000297537 EHD4Q9H223 541 aa28.18■■■□□ 2.1
GBX1-201ENST00000297537 MYH1P12882 1939 aa28.18■■■□□ 2.1
GBX1-201ENST00000297537 TRPA1O75762 1119 aa28.17■■■□□ 2.1
GBX1-201ENST00000297537 PTPRAP18433 802 aa28.17■■■□□ 2.1
GBX1-201ENST00000297537 PLCD1P51178 756 aa28.17■■■□□ 2.1
GBX1-201ENST00000297537 GTF2A2P52657 109 aa28.17■■■□□ 2.1
GBX1-201ENST00000297537 TTC6Q86TZ1 520 aa28.17■■■□□ 2.1
GBX1-201ENST00000297537 TICAM2Q86XR7 235 aa28.17■■■□□ 2.1
GBX1-201ENST00000297537 PTPN18Q99952 460 aa28.17■■■□□ 2.1
GBX1-201ENST00000297537 DDX60LQ5H9U9 1706 aaKnown RBP28.17■■■□□ 2.1
GBX1-201ENST00000297537 CAP2P40123 477 aa28.16■■■□□ 2.1
GBX1-201ENST00000297537 ZMYM1Q5SVZ6 1142 aa28.16■■■□□ 2.1
GBX1-201ENST00000297537 IFNL1Q8IU54 200 aa28.16■■■□□ 2.1
GBX1-201ENST00000297537 MCM9Q9NXL9 1143 aa28.16■■■□□ 2.1
GBX1-201ENST00000297537 KCNH4Q9UQ05 1017 aa28.16■■■□□ 2.1
GBX1-201ENST00000297537 LBX1P52954 281 aa28.15■■■□□ 2.1
GBX1-201ENST00000297537 SLC4A8Q2Y0W8 1093 aa28.15■■■□□ 2.1
GBX1-201ENST00000297537 SERPINB13Q9UIV8 391 aa28.15■■■□□ 2.1
GBX1-201ENST00000297537 TSKSQ9UJT2 592 aa28.15■■■□□ 2.1
GBX1-201ENST00000297537 SLC4A4Q9Y6R1 1079 aa28.15■■■□□ 2.1
GBX1-201ENST00000297537 M0R2C6 588 aa28.14■■■□□ 2.1
GBX1-201ENST00000297537 IGF2BP3O00425 579 aaKnown RBP eCLIP28.14■■■□□ 2.1
GBX1-201ENST00000297537 POLR3DP05423 398 aaPredicted RBP28.14■■■□□ 2.1
GBX1-201ENST00000297537 GABPAQ06546 454 aa28.14■■■□□ 2.1
GBX1-201ENST00000297537 TATDN1Q6P1N9 297 aa28.14■■■□□ 2.1
GBX1-201ENST00000297537 CRACR2BQ8N4Y2 399 aaPredicted RBP28.14■■■□□ 2.1
GBX1-201ENST00000297537 BRI3BPQ8WY22 251 aa28.14■■■□□ 2.1
GBX1-201ENST00000297537 SEC62Q99442 399 aaKnown RBP28.14■■■□□ 2.1
GBX1-201ENST00000297537 PRDM10Q9NQV6 1147 aa28.14■■■□□ 2.1
GBX1-201ENST00000297537 PICK1Q9NRD5 415 aa28.14■■■□□ 2.1
GBX1-201ENST00000297537 GPAA1O43292 621 aa28.13■■■□□ 2.09
GBX1-201ENST00000297537 SNAPC2Q13487 334 aa28.13■■■□□ 2.09
GBX1-201ENST00000297537 CFHR5Q9BXR6 569 aa28.13■■■□□ 2.09
GBX1-201ENST00000297537 AFG3L2Q9Y4W6 797 aa28.13■■■□□ 2.09
GBX1-201ENST00000297537 ZHX2Q9Y6X8 837 aa28.13■■■□□ 2.09
GBX1-201ENST00000297537 GSG1L2A8MUP6 293 aa28.12■■■□□ 2.09
GBX1-201ENST00000297537 JAG1P78504 1218 aa28.12■■■□□ 2.09
GBX1-201ENST00000297537 EVX2Q03828 476 aa28.12■■■□□ 2.09
GBX1-201ENST00000297537 NAV1Q8NEY1 1877 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 CCL15-CCL14A0A0B4J2E2 113 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 CXCL11O14625 94 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 ALDH1A1P00352 501 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 CETPP11597 493 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 CCL15Q16663 113 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 GIMAP6Q6P9H5 292 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 TRIM34Q9BYJ4 488 aa28.11■■■□□ 2.09
GBX1-201ENST00000297537 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.11■■■□□ 2.09
GBX1-201ENST00000297537 DOCK1Q14185 1865 aa28.1■■■□□ 2.09
GBX1-201ENST00000297537 CYP2D6P10635 497 aa28.1■■■□□ 2.09
GBX1-201ENST00000297537 GNAT2P19087 354 aa28.1■■■□□ 2.09
GBX1-201ENST00000297537 C12orf60Q5U649 245 aa28.1■■■□□ 2.09
GBX1-201ENST00000297537 GINM1Q9NU53 330 aa28.1■■■□□ 2.09
GBX1-201ENST00000297537 TAOK2Q9UL54 1235 aa28.1■■■□□ 2.09
GBX1-201ENST00000297537 TRIM6-TRIM34B2RNG4 842 aa28.09■■■□□ 2.09
GBX1-201ENST00000297537 USP17L12C9JPN9 530 aa28.09■■■□□ 2.09
GBX1-201ENST00000297537 USP17L21D6R901 530 aa28.09■■■□□ 2.09
GBX1-201ENST00000297537 CENPBP07199 599 aaPredicted RBP28.09■■■□□ 2.09
GBX1-201ENST00000297537 SHMT1P34896 483 aa28.09■■■□□ 2.09
GBX1-201ENST00000297537 MOGSQ13724 837 aa28.09■■■□□ 2.09
GBX1-201ENST00000297537 CTR9Q6PD62 1173 aa28.09■■■□□ 2.09
GBX1-201ENST00000297537 PATL2C9JE40 543 aaKnown RBP28.08■■■□□ 2.09
GBX1-201ENST00000297537 OTUD7BQ6GQQ9 843 aa28.08■■■□□ 2.09
GBX1-201ENST00000297537 CCDC84Q86UT8 332 aaPredicted RBP28.08■■■□□ 2.09
GBX1-201ENST00000297537 RILPL2Q969X0 211 aa28.08■■■□□ 2.09
GBX1-201ENST00000297537 PHIPQ8WWQ0 1821 aa28.07■■■□□ 2.08
GBX1-201ENST00000297537 TBC1D8O95759 1140 aa28.07■■■□□ 2.08
GBX1-201ENST00000297537 ASNSP08243 561 aa28.07■■■□□ 2.08
GBX1-201ENST00000297537 SHROOM1Q2M3G4 852 aaPredicted RBP28.07■■■□□ 2.08
GBX1-201ENST00000297537 SBK1Q52WX2 424 aa28.07■■■□□ 2.08
GBX1-201ENST00000297537 COL13A1Q5TAT6 717 aaPredicted RBP28.07■■■□□ 2.08
GBX1-201ENST00000297537 FAM43AQ8N2R8 423 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms