RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 LY9Q9HBG7 655 aa21.92■■□□□ 1.1
TRA2A-201ENST00000297071 FAM217BQ9NTX9 383 aaPredicted RBP21.92■■□□□ 1.1
TRA2A-201ENST00000297071 FBXO2Q9UK22 296 aaPredicted RBP21.92■■□□□ 1.1
TRA2A-201ENST00000297071 CEP131Q9UPN4 1083 aa21.92■■□□□ 1.1
TRA2A-201ENST00000297071 NFE2L3Q9Y4A8 694 aa21.92■■□□□ 1.1
TRA2A-201ENST00000297071 UBN2Q6ZU65 1347 aa21.92■■□□□ 1.1
TRA2A-201ENST00000297071 CDHR2Q9BYE9 1310 aa21.92■■□□□ 1.1
TRA2A-201ENST00000297071 SHANK3Q9BYB0 1731 aa21.92■■□□□ 1.1
TRA2A-201ENST00000297071 BCORQ6W2J9 1755 aa21.92■■□□□ 1.1
TRA2A-201ENST00000297071 CCDC175P0C221 793 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 OAS2P29728 719 aaKnown RBP21.91■■□□□ 1.1
TRA2A-201ENST00000297071 SCARF1Q14162 830 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 NKX1-1Q15270 411 aaPredicted RBP21.91■■□□□ 1.1
TRA2A-201ENST00000297071 SAFBQ15424 915 aaKnown RBP eCLIP21.91■■□□□ 1.1
TRA2A-201ENST00000297071 TBC1D10CQ8IV04 446 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 CEP112Q8N8E3 955 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 IQUBQ8NA54 791 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 CCDC51Q96ER9 411 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 AIFM3Q96NN9 605 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 CLIC6Q96NY7 704 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 PARD6BQ9BYG5 372 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 RAB21Q9UL25 225 aa21.91■■□□□ 1.1
TRA2A-201ENST00000297071 ERICH4A6NGS2 130 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 GOLGA8AA7E2F4 631 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 SASH3O75995 380 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 SRGAP1Q7Z6B7 1085 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 STK11IPQ8N1F8 1099 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 DCCP43146 1447 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 MYH2Q9UKX2 1941 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 AKR1B15C9JRZ8 316 aaPredicted RBP21.9■■□□□ 1.1
TRA2A-201ENST00000297071 RANBP6O60518 1105 aaKnown RBP21.9■■□□□ 1.1
TRA2A-201ENST00000297071 MMP1P03956 469 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 MSANTD4Q8NCY6 345 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 AK7Q96M32 723 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 CNNM2Q9H8M5 875 aa21.9■■□□□ 1.1
TRA2A-201ENST00000297071 SRPRBQ9Y5M8 271 aaKnown RBP21.9■■□□□ 1.1
TRA2A-201ENST00000297071 PCDH11XQ9BZA7 1347 aa21.89■■□□□ 1.09
TRA2A-201ENST00000297071 PCDH11YQ9BZA8 1340 aa21.89■■□□□ 1.09
TRA2A-201ENST00000297071 CDK11BP21127 795 aaKnown RBP21.89■■□□□ 1.09
TRA2A-201ENST00000297071 RBM33Q96EV2 1170 aaKnown RBP21.89■■□□□ 1.09
TRA2A-201ENST00000297071 CTAGE1Q96RT6 745 aa21.89■■□□□ 1.09
TRA2A-201ENST00000297071 RIPOR2Q9Y4F9 1068 aa21.89■■□□□ 1.09
TRA2A-201ENST00000297071 LRP5O75197 1615 aa21.88■■□□□ 1.09
TRA2A-201ENST00000297071 ITIH6Q6UXX5 1313 aa21.88■■□□□ 1.09
TRA2A-201ENST00000297071 SEC31AO94979 1220 aaKnown RBP21.88■■□□□ 1.09
TRA2A-201ENST00000297071 PBX1P40424 430 aa21.88■■□□□ 1.09
TRA2A-201ENST00000297071 TOGARAM2Q6ZUX3 1019 aa21.88■■□□□ 1.09
TRA2A-201ENST00000297071 UQCRFS1P1P0C7P4 283 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 CSB-PGBD3P0DP91 1061 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 IFIT5Q13325 482 aaKnown RBP21.87■■□□□ 1.09
TRA2A-201ENST00000297071 CDC23Q9UJX2 597 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 MYH8P13535 1937 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 BCL9LQ86UU0 1499 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 ARID4AP29374 1257 aaPredicted RBP21.87■■□□□ 1.09
TRA2A-201ENST00000297071 MCAMP43121 646 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 FMR1Q06787 632 aaKnown RBP eCLIP21.87■■□□□ 1.09
TRA2A-201ENST00000297071 KRT23Q9C075 422 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 CWC15Q9P013 229 aaKnown RBP21.87■■□□□ 1.09
TRA2A-201ENST00000297071 MYO1AQ9UBC5 1043 aa21.87■■□□□ 1.09
TRA2A-201ENST00000297071 MYH13Q9UKX3 1938 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 ACTN4O43707 911 aaKnown RBP21.86■■□□□ 1.09
TRA2A-201ENST00000297071 TOB1P50616 345 aaPredicted RBP21.86■■□□□ 1.09
TRA2A-201ENST00000297071 LONRF2Q1L5Z9 754 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 SPATA1Q5VX52 437 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 RASGRP2Q7LDG7 609 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 APTXQ7Z2E3 356 aaKnown RBP21.86■■□□□ 1.09
TRA2A-201ENST00000297071 RAB11FIP4Q86YS3 637 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 PDILTQ8N807 584 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 ZBTB38Q8NAP3 1195 aaPredicted RBP21.86■■□□□ 1.09
TRA2A-201ENST00000297071 PHKBQ93100 1093 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 DHX58Q96C10 678 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 ADGRG1Q9Y653 693 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 TNS3Q68CZ2 1445 aa21.86■■□□□ 1.09
TRA2A-201ENST00000297071 TCRBV5S4A2TA0A5A2 114 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 A1BGP04217 495 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 PPP2R5BQ15173 497 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 TMEM67Q5HYA8 995 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 TRIM22Q8IYM9 498 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 TMTC2Q8N394 836 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 ZBTB3Q9H5J0 574 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 SERTAD1Q9UHV2 236 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 CCDC196A0A1B0GTZ2 297 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 B4E1Z4 1266 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 ERLIN1O75477 346 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 CHMP4BP1P59074 171 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 GOLGA8FQ08AF8 430 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 GOLGA8DPQ0D2H9 430 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 TAF7LQ5H9L4 462 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 SLC9C2Q5TAH2 1124 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 MICU3Q86XE3 530 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 GOLGA5Q8TBA6 731 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 CCDC12Q8WUD4 166 aaPredicted RBP21.85■■□□□ 1.09
TRA2A-201ENST00000297071 STRBPQ96SI9 672 aaKnown RBP21.85■■□□□ 1.09
TRA2A-201ENST00000297071 GBP3Q9H0R5 595 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 AATFQ9NY61 560 aaKnown RBP eCLIP21.85■■□□□ 1.09
TRA2A-201ENST00000297071 IQSEC3Q9UPP2 1182 aaPredicted RBP21.85■■□□□ 1.09
TRA2A-201ENST00000297071 SLC12A7Q9Y666 1083 aa21.85■■□□□ 1.09
TRA2A-201ENST00000297071 DLEC1Q9Y238 1755 aa21.84■■□□□ 1.09
TRA2A-201ENST00000297071 PATL2C9JE40 543 aaKnown RBP21.84■■□□□ 1.09
TRA2A-201ENST00000297071 POLR3GO15318 223 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms