RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 CHRNA2Q15822 529 aa11.65□□□□□ -0.54
CCDC36-201ENST00000296449 NFXL1Q6ZNB6 911 aa11.65□□□□□ -0.54
CCDC36-201ENST00000296449 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
CCDC36-201ENST00000296449 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
CCDC36-201ENST00000296449 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
CCDC36-201ENST00000296449 ATRNO75882 1429 aa11.65□□□□□ -0.54
CCDC36-201ENST00000296449 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
CCDC36-201ENST00000296449 PTPREP23469 700 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 GPS2Q13227 327 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 RIC1Q4ADV7 1423 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 TMEM67Q5HYA8 995 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 DHX37Q8IY37 1157 aaKnown RBP11.64□□□□□ -0.55
CCDC36-201ENST00000296449 GRAMD1CQ8IYS0 662 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
CCDC36-201ENST00000296449 STK36Q9NRP7 1315 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 DACH1Q9UI36 760 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 CCDC175P0C221 793 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 SSRP1Q08945 709 aaKnown RBP11.64□□□□□ -0.55
CCDC36-201ENST00000296449 RAD51AP2Q09MP3 1159 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 LONRF2Q1L5Z9 754 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 INCENPQ9NQS7 918 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 SEC31BQ9NQW1 1179 aa11.64□□□□□ -0.55
CCDC36-201ENST00000296449 AKAP11Q9UKA4 1901 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 A0A1B0GTH6 734 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 SOWAHDA6NJG2 315 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
CCDC36-201ENST00000296449 MMP1P03956 469 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 IFIT5Q13325 482 aaKnown RBP11.63□□□□□ -0.55
CCDC36-201ENST00000296449 DIS3L2Q8IYB7 885 aaKnown RBP11.63□□□□□ -0.55
CCDC36-201ENST00000296449 TRIML1Q8N9V2 468 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 CABLES1Q8TDN4 633 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 PANX2Q96RD6 677 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 PIH1D3Q9NQM4 214 aaKnown RBP11.63□□□□□ -0.55
CCDC36-201ENST00000296449 PSD3Q9NYI0 1048 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 AKR1B15C9JRZ8 316 aaPredicted RBP11.63□□□□□ -0.55
CCDC36-201ENST00000296449 H3BQF6 201 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 CSF1RP07333 972 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 TCIRG1Q13488 830 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 BRD3Q15059 726 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 UBE3CQ15386 1083 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 ZSWIM4Q9H7M6 989 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 KCNJ14Q9UNX9 436 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 SLC12A7Q9Y666 1083 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 KCPQ6ZWJ8 1503 aa11.63□□□□□ -0.55
CCDC36-201ENST00000296449 ZNF532Q9HCE3 1301 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 A0A0U1RQJ8 604 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 MAP2K7O14733 419 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 TEX33O43247 280 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 ACTN4O43707 911 aaKnown RBP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 IFNAR1P17181 557 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 LIFRP42702 1097 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 PLCD1P51178 756 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 GYS2P54840 703 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 CHMP4BP1P59074 171 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 RAD9BQ6WBX8 426 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 APTXQ7Z2E3 356 aaKnown RBP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 SPATA20Q8TB22 786 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 ATRIPQ8WXE1 791 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 LZTFL1Q9NQ48 299 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 RIPOR2Q9Y4F9 1068 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 ERCC5P28715 1186 aaPredicted RBP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 SAFBQ15424 915 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 RILPL1Q5EBL4 403 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 USP49Q70CQ1 688 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 MSL3Q8N5Y2 521 aaKnown RBP11.62□□□□□ -0.55
CCDC36-201ENST00000296449 WASF1Q92558 559 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 PLA2G12BQ9BX93 195 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 ZSWIM5Q9P217 1185 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 ADAM21Q9UKJ8 722 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 PCDHB6Q9Y5E3 794 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 ADAMTSL3P82987 1691 aa11.62□□□□□ -0.55
CCDC36-201ENST00000296449 IFIT3O14879 490 aaKnown RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 PCCAP05165 728 aaPredicted RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 PDE6AP16499 860 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 TUBB4BP68371 445 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 TTF1Q15361 905 aaPredicted RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 CT47A1Q5JQC4 288 aaPredicted RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 HNRNPLLQ8WVV9 542 aaKnown RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 ZNF512BQ96KM6 892 aaPredicted RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 STRBPQ96SI9 672 aaKnown RBP11.61□□□□□ -0.55
CCDC36-201ENST00000296449 ANKZF1Q9H8Y5 726 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 TCRBV5S4A2TA0A5A2 114 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 RBL2Q08999 1139 aa11.61□□□□□ -0.55
CCDC36-201ENST00000296449 TRIM28Q13263 835 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms