RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 A0A1W2PQ64 194 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 A0A1W2PQD8 194 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 FMNL1O95466 1100 aaPredicted RBP13.64□□□□□ -0.23
RHO-201ENST00000296271 VPS72Q15906 364 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 ENAHQ8N8S7 591 aaPredicted RBP13.64□□□□□ -0.23
RHO-201ENST00000296271 CLIP2Q9UDT6 1046 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 A0A1B0GUL6 1792 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 GOLGA6L19H0YKK7 550 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 ADAMTS3O15072 1205 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 ZPR1O75312 459 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 PLEKHA8P1O95397 391 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 VEGFAP15692 232 aaPredicted RBP13.64□□□□□ -0.23
RHO-201ENST00000296271 TM4SF1P30408 202 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 PNOCQ13519 176 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 SEC23AQ15436 765 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 EARS2Q5JPH6 523 aaKnown RBP13.64□□□□□ -0.23
RHO-201ENST00000296271 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 DIS3L2Q8IYB7 885 aaKnown RBP13.64□□□□□ -0.23
RHO-201ENST00000296271 FANCBQ8NB91 859 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 NLRP3Q96P20 1036 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 USP21Q9UK80 565 aa13.64□□□□□ -0.23
RHO-201ENST00000296271 BECN2A8MW95 431 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 WNT7AO00755 349 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 CDKL5O76039 1030 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 IFNAR1P17181 557 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.23
RHO-201ENST00000296271 NFIXQ14938 502 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 CPLX2Q6PUV4 134 aaKnown RBP13.63□□□□□ -0.23
RHO-201ENST00000296271 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 CRACR2BQ8N4Y2 399 aaPredicted RBP13.63□□□□□ -0.23
RHO-201ENST00000296271 NSUN4Q96CB9 384 aaKnown RBP13.63□□□□□ -0.23
RHO-201ENST00000296271 UBAC1Q9BSL1 405 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
RHO-201ENST00000296271 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 NPHP1O15259 732 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 CTAGE5O15320 804 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 GNAT2P19087 354 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 GNL3LQ9NVN8 582 aaKnown RBP13.63□□□□□ -0.23
RHO-201ENST00000296271 VPS54Q9P1Q0 977 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
RHO-201ENST00000296271 TRIM29Q14134 588 aa13.62□□□□□ -0.23
RHO-201ENST00000296271 SLC10A5Q5PT55 438 aa13.62□□□□□ -0.23
RHO-201ENST00000296271 FOXP4Q8IVH2 680 aaPredicted RBP13.62□□□□□ -0.23
RHO-201ENST00000296271 SLC3A2P08195 630 aaKnown RBP13.62□□□□□ -0.23
RHO-201ENST00000296271 CMA1P23946 247 aa13.62□□□□□ -0.23
RHO-201ENST00000296271 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
RHO-201ENST00000296271 ARID3AQ99856 593 aa13.62□□□□□ -0.23
RHO-201ENST00000296271 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
RHO-201ENST00000296271 ANO10Q9NW15 660 aa13.62□□□□□ -0.23
RHO-201ENST00000296271 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 BTAF1O14981 1849 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 ERICH2A1L162 156 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 MMP1P03956 469 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 HIBADHP31937 336 aaKnown RBP13.61□□□□□ -0.23
RHO-201ENST00000296271 HSP90AA4PQ58FG1 418 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 NOSTRINQ8IVI9 506 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
RHO-201ENST00000296271 SYKP43405 635 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 DIXDC1Q155Q3 683 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 CABP5Q9NP86 173 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 FAM13BQ9NYF5 915 aa13.61□□□□□ -0.23
RHO-201ENST00000296271 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 SART3Q15020 963 aaKnown RBP13.6□□□□□ -0.23
RHO-201ENST00000296271 PKN1Q16512 942 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 CEP57L1Q8IYX8 460 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 PDILTQ8N807 584 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
RHO-201ENST00000296271 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
RHO-201ENST00000296271 USP27XA6NNY8 438 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 TPM2P07951 284 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 TPTE2Q6XPS3 522 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 METTL16Q86W50 562 aaKnown RBP13.6□□□□□ -0.23
RHO-201ENST00000296271 ESR2Q92731 530 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
RHO-201ENST00000296271 HPSEQ9Y251 543 aa13.6□□□□□ -0.23
RHO-201ENST00000296271 LMOD1P29536 600 aaPredicted RBP13.59□□□□□ -0.23
RHO-201ENST00000296271 DYNLL2Q96FJ2 89 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 SCN7AQ01118 1682 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 TNRC6CQ9HCJ0 1690 aaKnown RBP13.59□□□□□ -0.23
RHO-201ENST00000296271 GOLGA6L6A8MZA4 724 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 NCAPHQ15003 741 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
RHO-201ENST00000296271 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
RHO-201ENST00000296271 C16orf45Q96MC5 204 aaPredicted RBP13.59□□□□□ -0.23
RHO-201ENST00000296271 ANKIB1Q9P2G1 1089 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 ANAPC4Q9UJX5 808 aa13.59□□□□□ -0.23
RHO-201ENST00000296271 BMP6P22004 513 aa13.58□□□□□ -0.24
RHO-201ENST00000296271 FUT2Q10981 343 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms