RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CEP104O60308 925 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 FCHSD1Q86WN1 690 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
SSRP1-202ENST00000293880 GPR161Q8N6U8 529 aaKnown RBP17.98■□□□□ 0.47
SSRP1-202ENST00000293880 STAMQ92783 540 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 VCX3BQ9H321 246 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 GOLGA6BA6NDN3 693 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 PNOCQ13519 176 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 FNBP1Q96RU3 617 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 CALML3P27482 149 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 LRMPQ12912 555 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 NELFCDQ8IXH7 590 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 IFT74Q96LB3 600 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 TAF12Q16514 161 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 SLF1Q9BQI6 1058 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 DAPK3O43293 454 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 HDAC9Q9UKV0 1011 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 IRS4O14654 1257 aaPredicted RBP17.97■□□□□ 0.47
SSRP1-202ENST00000293880 GAS8O95995 478 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 PRR16Q569H4 304 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
SSRP1-202ENST00000293880 CABLES1Q8TDN4 633 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 NFATC2IPQ8NCF5 419 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 CXorf38Q8TB03 319 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 ADKP55263 362 aaKnown RBP17.97■□□□□ 0.47
SSRP1-202ENST00000293880 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
SSRP1-202ENST00000293880 ASIC3Q9UHC3 531 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 KCNH3Q9ULD8 1083 aa17.97■□□□□ 0.47
SSRP1-202ENST00000293880 CDC37L1Q7L3B6 337 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 SDCCAG8Q86SQ7 713 aaPredicted RBP17.96■□□□□ 0.47
SSRP1-202ENST00000293880 ARFGAP2Q8N6H7 521 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 KIFAP3Q92845 792 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 PHKBQ93100 1093 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 TBC1D8O95759 1140 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 IFT20Q8IY31 132 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 TTLL3Q9Y4R7 772 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 CALUO43852 315 aaPredicted RBP17.96■□□□□ 0.47
SSRP1-202ENST00000293880 EIF4A2Q14240 407 aaKnown RBP17.96■□□□□ 0.47
SSRP1-202ENST00000293880 HHATQ5VTY9 493 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 CSGALNACT2Q8N6G5 542 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 FAM227BQ96M60 508 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.96■□□□□ 0.47
SSRP1-202ENST00000293880 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
SSRP1-202ENST00000293880 SNX14Q9Y5W7 946 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 NSD2O96028 1365 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 TTC41PQ6P2S7 1318 aa17.96■□□□□ 0.47
SSRP1-202ENST00000293880 TUBB4AP04350 444 aa17.96■□□□□ 0.46
SSRP1-202ENST00000293880 NCBP1Q09161 790 aaKnown RBP17.96■□□□□ 0.46
SSRP1-202ENST00000293880 PAK1Q13153 545 aa17.96■□□□□ 0.46
SSRP1-202ENST00000293880 AP1ARQ63HQ0 302 aa17.96■□□□□ 0.46
SSRP1-202ENST00000293880 TYW1BQ6NUM6 668 aa17.96■□□□□ 0.46
SSRP1-202ENST00000293880 MSANTD4Q8NCY6 345 aa17.96■□□□□ 0.46
SSRP1-202ENST00000293880 COG7P83436 770 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 ANO1Q5XXA6 986 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 CASC4Q6P4E1 433 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 NOX5Q96PH1 765 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 NELFBQ8WX92 580 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 MAN1A1P33908 653 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 USH1GQ495M9 461 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 CAPN12Q6ZSI9 719 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 ARHGAP45Q92619 1136 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 XAB2Q9HCS7 855 aaKnown RBP17.95■□□□□ 0.46
SSRP1-202ENST00000293880 GNAT2P19087 354 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 CCDC62Q6P9F0 684 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
SSRP1-202ENST00000293880 ZNF594Q96JF6 807 aaPredicted RBP17.95■□□□□ 0.46
SSRP1-202ENST00000293880 ZNF365Q70YC5 407 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 SND1Q7KZF4 910 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSRP1-202ENST00000293880 VSIG1Q86XK7 387 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 TAB3Q8N5C8 712 aaPredicted RBP17.94■□□□□ 0.46
SSRP1-202ENST00000293880 KCNJ14Q9UNX9 436 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 WHAMMP3Q1A5X7 153 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 LDHBP07195 334 aaKnown RBP17.94■□□□□ 0.46
SSRP1-202ENST00000293880 POLD1P28340 1107 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 NLRP12P59046 1061 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 SH2D4BQ5SQS7 431 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 UBL4BQ8N7F7 174 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 GBP5Q96PP8 586 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 NUF2Q9BZD4 464 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 COBLO75128 1261 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 MYCLP12524 364 aaPredicted RBP17.94■□□□□ 0.46
SSRP1-202ENST00000293880 SESN3P58005 492 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 BSPRYQ5W0U4 402 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 CTTNBP2NLQ9P2B4 639 aa17.94■□□□□ 0.46
SSRP1-202ENST00000293880 SMIM24O75264 130 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 GNA11P29992 359 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 TTF2Q9UNY4 1162 aaKnown RBP17.93■□□□□ 0.46
SSRP1-202ENST00000293880 TACC3Q9Y6A5 838 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 V9GY48 417 aaPredicted RBP17.93■□□□□ 0.46
SSRP1-202ENST00000293880 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
SSRP1-202ENST00000293880 VPS41P49754 854 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 TSNAXIP1Q2TAA8 658 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 NLRP3Q96P20 1036 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 VPS37BQ9H9H4 285 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 PRDM1O75626 825 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 CCDC38Q502W7 563 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 MYCBPQ99417 103 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms