RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 USP14P54578 494 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 SMYD4Q8IYR2 804 aaPredicted RBP15.37■□□□□ 0.05
RDH13-201ENST00000291892 MAN1B1Q9UKM7 699 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 KCNH3Q9ULD8 1083 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 ZNF609O15014 1411 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 METP08581 1390 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 GRIN2DO15399 1336 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 PPP1R12BO60237 982 aaPredicted RBP15.37■□□□□ 0.05
RDH13-201ENST00000291892 MCMDC2Q4G0Z9 681 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 CEP85LQ5SZL2 805 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
RDH13-201ENST00000291892 ZC3H4Q9UPT8 1303 aaKnown RBP15.36■□□□□ 0.05
RDH13-201ENST00000291892 PPP1R12AO14974 1030 aaPredicted RBP15.36■□□□□ 0.05
RDH13-201ENST00000291892 CHUKO15111 745 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 C2orf54Q08AI8 447 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 ARL8AQ96BM9 186 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 FAXDC2Q96IV6 333 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
RDH13-201ENST00000291892 SALL1Q9NSC2 1324 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 PES1O00541 588 aaKnown RBP15.36■□□□□ 0.05
RDH13-201ENST00000291892 ATP1A1P05023 1023 aaKnown RBP15.36■□□□□ 0.05
RDH13-201ENST00000291892 HDGFP51858 240 aaKnown RBP15.36■□□□□ 0.05
RDH13-201ENST00000291892 SF3A3Q12874 501 aaKnown RBP eCLIP15.36■□□□□ 0.059e-7■■■■■ 44.5
RDH13-201ENST00000291892 IFT88Q13099 833 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 KLC4Q9NSK0 619 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 MCM8Q9UJA3 840 aa15.36■□□□□ 0.05
RDH13-201ENST00000291892 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 RUFY1Q96T51 708 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 ALKQ9UM73 1620 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 POLR2DO15514 142 aaKnown RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 SHOX2O60902 331 aaPredicted RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 CDR1P51861 262 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 SLC7A5Q01650 507 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 GRIN1Q05586 938 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 EZH2Q15910 746 aaKnown RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 WDR93Q6P2C0 686 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 TICAM2Q86XR7 235 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 MED15Q96RN5 788 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 PSMB7Q99436 277 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 DBNLQ9UJU6 430 aaKnown RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 FNTAP49354 379 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 SEC24CP53992 1094 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 GUCY1A3Q02108 690 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 SLC39A14Q15043 492 aa15.35■□□□□ 0.05
RDH13-201ENST00000291892 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 MSL3Q8N5Y2 521 aaKnown RBP15.35■□□□□ 0.05
RDH13-201ENST00000291892 BCCIPQ9P287 314 aaKnown RBP eCLIP15.35■□□□□ 0.05
RDH13-201ENST00000291892 ERVK-24P63145 666 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 SARNPP82979 210 aaKnown RBP15.34■□□□□ 0.05
RDH13-201ENST00000291892 APBA1Q02410 837 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 DBNDD2Q9BQY9 259 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 VIPAS39Q9H9C1 493 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 SERTAD1Q9UHV2 236 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 RNF225M0QZC1 329 aaPredicted RBP15.34■□□□□ 0.05
RDH13-201ENST00000291892 MEFVO15553 781 aaPredicted RBP15.34■□□□□ 0.05
RDH13-201ENST00000291892 MFAP3LO75121 409 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 SF3B2Q13435 895 aaKnown RBP15.34■□□□□ 0.05
RDH13-201ENST00000291892 NR1I3Q14994 352 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 RASGRP2Q7LDG7 609 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 VPS37DQ86XT2 251 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 PHKBQ93100 1093 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
RDH13-201ENST00000291892 UBE2Q2LH0YL09 131 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 IRF6O14896 467 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 AFMP43652 599 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 PPARAQ07869 468 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 GPIHBP1Q8IV16 184 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 CALR3Q96L12 384 aaKnown RBP15.33■□□□□ 0.05
RDH13-201ENST00000291892 PANX2Q96RD6 677 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 ABCC6O95255 1503 aa15.33■□□□□ 0.05
RDH13-201ENST00000291892 CCDC40Q4G0X9 1142 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
RDH13-201ENST00000291892 HDAC7Q8WUI4 952 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 NEUROD6Q96NK8 337 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 CHP1Q99653 195 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 TRIM6Q9C030 488 aaPredicted RBP15.33■□□□□ 0.04
RDH13-201ENST00000291892 VPS16Q9H269 839 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 TTF2Q9UNY4 1162 aaKnown RBP15.33■□□□□ 0.04
RDH13-201ENST00000291892 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 PRR36Q9H6K5 1346 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 PRAMEF22A3QJZ6 481 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 BACH1O14867 736 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 GYPCP04921 128 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 HMGB1P09429 215 aaKnown RBP15.33■□□□□ 0.04
RDH13-201ENST00000291892 ZNF18P17022 549 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 TFCP2Q12800 502 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 POSTNQ15063 836 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 JADE2Q9NQC1 790 aa15.33■□□□□ 0.04
RDH13-201ENST00000291892 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.33■□□□□ 0.04
RDH13-201ENST00000291892 KRT14P02533 472 aa15.32■□□□□ 0.04
RDH13-201ENST00000291892 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
RDH13-201ENST00000291892 LTKP29376 864 aa15.32■□□□□ 0.04
RDH13-201ENST00000291892 CDC25CP30307 473 aa15.32■□□□□ 0.04
RDH13-201ENST00000291892 ARHGAP25P42331 645 aa15.32■□□□□ 0.04
RDH13-201ENST00000291892 CCNHP51946 323 aaPredicted RBP15.32■□□□□ 0.04
RDH13-201ENST00000291892 EXOSC10Q01780 885 aaKnown RBP15.32■□□□□ 0.04
RDH13-201ENST00000291892 BRAPQ7Z569 592 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms