RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 VGLL4Q14135 290 aa32.3■■■□□ 2.76
SSU72-201ENST00000291386 GIMAP6Q6P9H5 292 aa32.3■■■□□ 2.76
SSU72-201ENST00000291386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.3■■■□□ 2.768e-6■■□□□ 11.4
SSU72-201ENST00000291386 MCM9Q9NXL9 1143 aa32.3■■■□□ 2.76
SSU72-201ENST00000291386 CSADQ9Y600 493 aa32.3■■■□□ 2.76
SSU72-201ENST00000291386 CEP350Q5VT06 3117 aa32.3■■■□□ 2.76
SSU72-201ENST00000291386 HIP1O00291 1037 aa32.29■■■□□ 2.76
SSU72-201ENST00000291386 NOL9Q5SY16 702 aaKnown RBP32.29■■■□□ 2.76
SSU72-201ENST00000291386 BAZ2AQ9UIF9 1905 aaKnown RBP32.28■■■□□ 2.76
SSU72-201ENST00000291386 GSG1L2A8MUP6 293 aa32.28■■■□□ 2.76
SSU72-201ENST00000291386 INPP5BP32019 993 aa32.28■■■□□ 2.76
SSU72-201ENST00000291386 DDRGK1Q96HY6 314 aa32.28■■■□□ 2.76
SSU72-201ENST00000291386 TAOK2Q9UL54 1235 aa32.28■■■□□ 2.76
SSU72-201ENST00000291386 SNCAIPQ9Y6H5 919 aa32.28■■■□□ 2.76
SSU72-201ENST00000291386 LAMB1P07942 1786 aa32.27■■■□□ 2.76
SSU72-201ENST00000291386 SLURP2P0DP57 97 aa32.27■■■□□ 2.76
SSU72-201ENST00000291386 MCMDC2Q4G0Z9 681 aa32.27■■■□□ 2.76
SSU72-201ENST00000291386 ZKSCAN4Q969J2 545 aaPredicted RBP32.27■■■□□ 2.76
SSU72-201ENST00000291386 PATL2C9JE40 543 aaKnown RBP32.26■■■□□ 2.75
SSU72-201ENST00000291386 CTNND1O60716 968 aaKnown RBP32.26■■■□□ 2.75
SSU72-201ENST00000291386 POLR3DP05423 398 aaPredicted RBP32.26■■■□□ 2.75
SSU72-201ENST00000291386 ZBTB48P10074 688 aaPredicted RBP32.26■■■□□ 2.75
SSU72-201ENST00000291386 GRM1Q13255 1194 aa32.26■■■□□ 2.75
SSU72-201ENST00000291386 NMIQ13287 307 aaPredicted RBP32.26■■■□□ 2.75
SSU72-201ENST00000291386 SPRYD7Q5W111 196 aa32.26■■■□□ 2.75
SSU72-201ENST00000291386 FAM227BQ96M60 508 aa32.26■■■□□ 2.75
SSU72-201ENST00000291386 DNAJC18Q9H819 358 aa32.26■■■□□ 2.75
SSU72-201ENST00000291386 A0A0D9SFI3 127 aa32.25■■■□□ 2.75
SSU72-201ENST00000291386 PLCD1P51178 756 aa32.25■■■□□ 2.75
SSU72-201ENST00000291386 WNK4Q96J92 1243 aa32.25■■■□□ 2.75
SSU72-201ENST00000291386 ELP3Q9H9T3 547 aa32.25■■■□□ 2.75
SSU72-201ENST00000291386 SERPINB13Q9UIV8 391 aa32.25■■■□□ 2.75
SSU72-201ENST00000291386 FAM196BA6NMK8 535 aa32.24■■■□□ 2.75
SSU72-201ENST00000291386 AOC2O75106 756 aa32.24■■■□□ 2.75
SSU72-201ENST00000291386 CRACR2BQ8N4Y2 399 aaPredicted RBP32.24■■■□□ 2.75
SSU72-201ENST00000291386 DOCK1Q14185 1865 aa32.24■■■□□ 2.75
SSU72-201ENST00000291386 SPDYE5A6NIY4 337 aa32.23■■■□□ 2.75
SSU72-201ENST00000291386 GABPAQ06546 454 aa32.23■■■□□ 2.75
SSU72-201ENST00000291386 SBK1Q52WX2 424 aa32.23■■■□□ 2.75
SSU72-201ENST00000291386 SCYL3Q8IZE3 742 aa32.23■■■□□ 2.75
SSU72-201ENST00000291386 ARPP21Q9UBL0 812 aaPredicted RBP32.23■■■□□ 2.75
SSU72-201ENST00000291386 C12orf60Q5U649 245 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 TATDN1Q6P1N9 297 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 CTR9Q6PD62 1173 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 CCDC129Q6ZRS4 1044 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 SKAP1Q86WV1 359 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 ERO1BQ86YB8 467 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 REM2Q8IYK8 340 aaPredicted RBP32.22■■■□□ 2.75
SSU72-201ENST00000291386 TRIM34Q9BYJ4 488 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 EPB41L4AQ9HCS5 686 aaPredicted RBP32.22■■■□□ 2.75
SSU72-201ENST00000291386 DIAPH3Q9NSV4 1193 aa32.22■■■□□ 2.75
SSU72-201ENST00000291386 USP17L12C9JPN9 530 aa32.21■■■□□ 2.75
SSU72-201ENST00000291386 USP17L21D6R901 530 aa32.21■■■□□ 2.75
SSU72-201ENST00000291386 SLC4A8Q2Y0W8 1093 aa32.21■■■□□ 2.75
SSU72-201ENST00000291386 AMOTL1Q8IY63 956 aa32.21■■■□□ 2.75
SSU72-201ENST00000291386 IFNL3Q8IZI9 196 aa32.21■■■□□ 2.75
SSU72-201ENST00000291386 OPTNQ96CV9 577 aa32.21■■■□□ 2.75
SSU72-201ENST00000291386 ZIC5Q96T25 663 aa32.21■■■□□ 2.75
SSU72-201ENST00000291386 GJA5P36382 358 aa32.2■■■□□ 2.75
SSU72-201ENST00000291386 CAP2P40123 477 aa32.2■■■□□ 2.75
SSU72-201ENST00000291386 KIF23Q02241 960 aaPredicted RBP32.2■■■□□ 2.75
SSU72-201ENST00000291386 PPATQ06203 517 aa32.2■■■□□ 2.75
SSU72-201ENST00000291386 NACAP1Q9BZK3 213 aa32.2■■■□□ 2.75
SSU72-201ENST00000291386 ATAD5Q96QE3 1844 aa32.19■■■□□ 2.74
SSU72-201ENST00000291386 CYP2D6P10635 497 aa32.19■■■□□ 2.74
SSU72-201ENST00000291386 RRP1BQ14684 758 aaKnown RBP32.19■■■□□ 2.74
SSU72-201ENST00000291386 BMP2KLQ5H9B9 411 aa32.19■■■□□ 2.74
SSU72-201ENST00000291386 GINM1Q9NU53 330 aa32.19■■■□□ 2.74
SSU72-201ENST00000291386 FOXP2O15409 715 aa32.18■■■□□ 2.74
SSU72-201ENST00000291386 APPP05067 770 aa32.18■■■□□ 2.74
SSU72-201ENST00000291386 MFAP1P55081 439 aaKnown RBP32.18■■■□□ 2.74
SSU72-201ENST00000291386 MAP2K1Q02750 393 aaPredicted RBP32.18■■■□□ 2.74
SSU72-201ENST00000291386 CWC27Q6UX04 472 aaKnown RBP32.18■■■□□ 2.74
SSU72-201ENST00000291386 SWAP70Q9UH65 585 aa32.18■■■□□ 2.74
SSU72-201ENST00000291386 CCDC171Q6TFL3 1326 aa32.18■■■□□ 2.74
SSU72-201ENST00000291386 EVX2Q03828 476 aa32.17■■■□□ 2.74
SSU72-201ENST00000291386 PPIL2Q13356 520 aa32.17■■■□□ 2.74
SSU72-201ENST00000291386 ZNF589Q86UQ0 364 aaPredicted RBP32.17■■■□□ 2.74
SSU72-201ENST00000291386 CNKSR2Q8WXI2 1034 aa32.17■■■□□ 2.74
SSU72-201ENST00000291386 PICK1Q9NRD5 415 aa32.17■■■□□ 2.74
SSU72-201ENST00000291386 PTPRAP18433 802 aa32.16■■■□□ 2.74
SSU72-201ENST00000291386 SHMT1P34896 483 aa32.16■■■□□ 2.74
SSU72-201ENST00000291386 TDO2P48775 406 aa32.16■■■□□ 2.74
SSU72-201ENST00000291386 OTUD5Q96G74 571 aa32.16■■■□□ 2.74
SSU72-201ENST00000291386 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.16■■■□□ 2.74
SSU72-201ENST00000291386 PHIPQ8WWQ0 1821 aa32.15■■■□□ 2.74
SSU72-201ENST00000291386 MANSC4A6NHS7 340 aaPredicted RBP32.15■■■□□ 2.74
SSU72-201ENST00000291386 CHMLP26374 656 aa32.15■■■□□ 2.74
SSU72-201ENST00000291386 ALX1Q15699 326 aa32.15■■■□□ 2.74
SSU72-201ENST00000291386 CYP2D7A0A087X1C5 515 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 HSPD1P10809 573 aaKnown RBP32.14■■■□□ 2.74
SSU72-201ENST00000291386 TM4SF4P48230 202 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 INHBEP58166 350 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 MKRN3Q13064 507 aaKnown RBP32.14■■■□□ 2.74
SSU72-201ENST00000291386 VPS53Q5VIR6 699 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 NAPBQ9H115 298 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 WBP1LQ9NX94 342 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 RAD50Q92878 1312 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 ROBO3Q96MS0 1386 aa32.14■■■□□ 2.74
SSU72-201ENST00000291386 ZMYM6O95789 1325 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms