RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 AKAP12Q02952 1782 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 DNA2P51530 1060 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 PPARAQ07869 468 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 OXER1Q8TDS5 423 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.49
SMAD6-201ENST00000288840 HPS5Q9UPZ3 1129 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 RIPOR2Q9Y4F9 1068 aa18.14■□□□□ 0.49
SMAD6-201ENST00000288840 CCDC194A0A1B0GVG4 234 aa18.13■□□□□ 0.49
SMAD6-201ENST00000288840 ENOX2Q16206 610 aaKnown RBP18.13■□□□□ 0.49
SMAD6-201ENST00000288840 KRBA2Q6ZNG9 492 aa18.13■□□□□ 0.49
SMAD6-201ENST00000288840 ZPR1O75312 459 aa18.13■□□□□ 0.49
SMAD6-201ENST00000288840 DEXIO95424 95 aa18.13■□□□□ 0.49
SMAD6-201ENST00000288840 EIF5P55010 431 aaKnown RBP18.13■□□□□ 0.49
SMAD6-201ENST00000288840 UBE3CQ15386 1083 aa18.13■□□□□ 0.49
SMAD6-201ENST00000288840 RILPL1Q5EBL4 403 aa18.13■□□□□ 0.49
SMAD6-201ENST00000288840 HEATR3Q7Z4Q2 680 aa18.13■□□□□ 0.49
SMAD6-201ENST00000288840 SHC4Q6S5L8 630 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 ILDR1Q86SU0 546 aaPredicted RBP18.12■□□□□ 0.49
SMAD6-201ENST00000288840 CAGE1Q8TC20 777 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 EPC1Q9H2F5 836 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 SAMSN1Q9NSI8 373 aaKnown RBP18.12■□□□□ 0.49
SMAD6-201ENST00000288840 MAGEC2Q9UBF1 373 aaPredicted RBP18.12■□□□□ 0.49
SMAD6-201ENST00000288840 GRIN1Q05586 938 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 KRT222Q8N1A0 295 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 ZNF397Q8NF99 534 aaPredicted RBP18.12■□□□□ 0.49
SMAD6-201ENST00000288840 EPSTI1Q96J88 318 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 PPP1R13BQ96KQ4 1090 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 CCDC87Q9NVE4 849 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 KRT2P35908 639 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 CSRNP2Q9H175 543 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 KAT14Q9H8E8 782 aa18.12■□□□□ 0.49
SMAD6-201ENST00000288840 SAP30BPQ9UHR5 308 aaKnown RBP18.12■□□□□ 0.49
SMAD6-201ENST00000288840 FAM205CA6NFA0 338 aa18.11■□□□□ 0.49
SMAD6-201ENST00000288840 USP49Q70CQ1 688 aa18.11■□□□□ 0.49
SMAD6-201ENST00000288840 ZNF444Q8N0Y2 327 aaPredicted RBP18.11■□□□□ 0.49
SMAD6-201ENST00000288840 CRKLP46109 303 aaKnown RBP18.11■□□□□ 0.49
SMAD6-201ENST00000288840 ENGASEQ8NFI3 743 aa18.11■□□□□ 0.49
SMAD6-201ENST00000288840 F8W031 263 aaPredicted RBP18.11■□□□□ 0.49
SMAD6-201ENST00000288840 KIF5CO60282 957 aa18.11■□□□□ 0.49
SMAD6-201ENST00000288840 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMAD6-201ENST00000288840 UBA7P41226 1012 aa18.11■□□□□ 0.49
SMAD6-201ENST00000288840 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
SMAD6-201ENST00000288840 CTNND2Q9UQB3 1225 aa18.11■□□□□ 0.49
SMAD6-201ENST00000288840 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 FAM193AP78312 1265 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 MCM6Q14566 821 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 RASGRP4Q8TDF6 673 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 EVCP57679 992 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 MROH7-TTC4A0A0A0MT08 1334 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 MROH5Q6ZUA9 1318 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 RBM6P78332 1123 aaKnown RBP18.1■□□□□ 0.49
SMAD6-201ENST00000288840 ARMCX5Q6P1M9 558 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 IGSF22Q8N9C0 903 aa18.1■□□□□ 0.49
SMAD6-201ENST00000288840 CCDC47Q96A33 483 aaKnown RBP18.1■□□□□ 0.49
SMAD6-201ENST00000288840 ARHGAP23Q9P227 1491 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 SMIM22K7EJ46 135 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 TANGO6Q9C0B7 1094 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 UBN2Q6ZU65 1347 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 WTIPA6NIX2 430 aaPredicted RBP18.09■□□□□ 0.49
SMAD6-201ENST00000288840 NMT2O60551 498 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 PRR29P0C7W0 189 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 TNNT3P45378 269 aaPredicted RBP18.09■□□□□ 0.49
SMAD6-201ENST00000288840 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 IDEP14735 1019 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 ZNF569Q5MCW4 686 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 GPKOWQ92917 476 aaPredicted RBP eCLIP18.09■□□□□ 0.49
SMAD6-201ENST00000288840 CDK5RAP3Q96JB5 506 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 NLRP3Q96P20 1036 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 TRIM34Q9BYJ4 488 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 CRNKL1Q9BZJ0 848 aaKnown RBP18.09■□□□□ 0.49
SMAD6-201ENST00000288840 LY9Q9HBG7 655 aa18.09■□□□□ 0.49
SMAD6-201ENST00000288840 GNAT2P19087 354 aa18.08■□□□□ 0.49
SMAD6-201ENST00000288840 LRP10Q7Z4F1 713 aa18.08■□□□□ 0.49
SMAD6-201ENST00000288840 OGFRQ9NZT2 677 aa18.08■□□□□ 0.49
SMAD6-201ENST00000288840 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 STAT6P42226 847 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 PDE4BQ07343 736 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 IMPACTQ9P2X3 320 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 PLEKHA8P1O95397 391 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 SIK1P57059 783 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 SOGA3Q5TF21 947 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 SMAP1Q8IYB5 467 aaPredicted RBP18.08■□□□□ 0.48
SMAD6-201ENST00000288840 TAB2Q9NYJ8 693 aa18.08■□□□□ 0.48
SMAD6-201ENST00000288840 CYP19A1P11511 503 aaPredicted RBP18.07■□□□□ 0.48
SMAD6-201ENST00000288840 IKQ13123 557 aaPredicted RBP18.07■□□□□ 0.48
SMAD6-201ENST00000288840 CCDC102AQ96A19 550 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 HINFPQ9BQA5 517 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 ETF1P62495 437 aaKnown RBP18.07■□□□□ 0.48
SMAD6-201ENST00000288840 CCDC178Q5BJE1 867 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 KIAA1328Q86T90 577 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 DRC1Q96MC2 740 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 GSG1L2A8MUP6 293 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 PHACTR2O75167 634 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 EIF6P56537 245 aaKnown RBP18.07■□□□□ 0.48
SMAD6-201ENST00000288840 CCZ1BP86790 482 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms