RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ZSCAN10Q96SZ4 725 aaPredicted RBP11.87□□□□□ -0.51
C9orf43-201ENST00000288462 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 SLX4Q8IY92 1834 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 MYH1P12882 1939 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 BAG3O95817 575 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 SLC3A2P08195 630 aaKnown RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 CYP2D6P10635 497 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 EVX2Q03828 476 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 SLC15A2Q16348 729 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 RTN1Q16799 776 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 BRAPQ7Z569 592 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 FAM163AQ96GL9 167 aaPredicted RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 RCOR1Q9UKL0 485 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 ADAMTSL1Q8N6G6 1762 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 GPR75-ASB3A0A0A6YYF3 556 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 LETM1O95202 739 aaPredicted RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 IARSP41252 1262 aaKnown RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 KIF23Q02241 960 aaPredicted RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 EZH2Q15910 746 aaKnown RBP11.86□□□□□ -0.51
C9orf43-201ENST00000288462 MFSD14BQ5SR56 506 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 C12orf60Q5U649 245 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 OTUD7BQ6GQQ9 843 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 MPNDQ8N594 471 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 PHKBQ93100 1093 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 USP28Q96RU2 1077 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
C9orf43-201ENST00000288462 CCDC196A0A1B0GTZ2 297 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 USP17L8P0C7I0 530 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 BTDP43251 543 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 STYK1Q6J9G0 422 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 IQCA1Q86XH1 822 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 RBSNQ9H1K0 784 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 MCM9Q9NXL9 1143 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 SNED1Q8TER0 1413 aa11.85□□□□□ -0.51
C9orf43-201ENST00000288462 PRDM1O75626 825 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 USP5P45974 858 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 NASPP49321 788 aaPredicted RBP11.84□□□□□ -0.51
C9orf43-201ENST00000288462 PDE4BQ07343 736 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 SSRP1Q08945 709 aaKnown RBP11.84□□□□□ -0.51
C9orf43-201ENST00000288462 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 DPP8Q6V1X1 898 aaPredicted RBP11.84□□□□□ -0.51
C9orf43-201ENST00000288462 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 FANCBQ8NB91 859 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 GJB4Q9NTQ9 266 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 DDAH1O94760 285 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 PLCG2P16885 1265 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 LIG1P18858 919 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
C9orf43-201ENST00000288462 IFIT1BQ5T764 474 aaKnown RBP11.84□□□□□ -0.51
C9orf43-201ENST00000288462 KRT40Q6A162 431 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 C2CD5Q86YS7 1000 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 WASF1Q92558 559 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
C9orf43-201ENST00000288462 TSPY26PQ9H489 355 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 RTEL1Q9NZ71 1219 aa11.84□□□□□ -0.51
C9orf43-201ENST00000288462 RHBDL3P58872 404 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 GOLGA6L4A6NEF3 574 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 CALM1P0DP23 149 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 CALM2P0DP24 149 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 CALM3P0DP25 149 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 GTF2IP78347 998 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 TROAPQ12815 778 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 CATIPQ7Z7H3 387 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 AMOTL1Q8IY63 956 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 CRACR2BQ8N4Y2 399 aaPredicted RBP11.83□□□□□ -0.52
C9orf43-201ENST00000288462 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 ZC3H12CQ9C0D7 883 aaKnown RBP11.83□□□□□ -0.52
C9orf43-201ENST00000288462 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
C9orf43-201ENST00000288462 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 SCN9AQ15858 1988 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 PSME4Q14997 1843 aa11.83□□□□□ -0.52
C9orf43-201ENST00000288462 KIF13BQ9NQT8 1826 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 H0YIN7 160 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 DEXIO95424 95 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 YEATS4O95619 227 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 FUT2Q10981 343 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 CERS5Q8N5B7 392 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 NUP133Q8WUM0 1156 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 EYA3Q99504 573 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 RNF26Q9BY78 433 aaPredicted RBP11.82□□□□□ -0.52
C9orf43-201ENST00000288462 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
C9orf43-201ENST00000288462 DAGLAQ9Y4D2 1042 aa11.82□□□□□ -0.52
C9orf43-201ENST00000288462 FLT1P17948 1338 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms