RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SNCAIPQ9Y6H5 919 aa23.9■■□□□ 1.42
TIMP4-201ENST00000287814 OTOFQ9HC10 1997 aa23.9■■□□□ 1.42
TIMP4-201ENST00000287814 PLCD1P51178 756 aa23.89■■□□□ 1.42
TIMP4-201ENST00000287814 METTL16Q86W50 562 aaKnown RBP23.89■■□□□ 1.42
TIMP4-201ENST00000287814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.89■■□□□ 1.42
TIMP4-201ENST00000287814 ATP8A2Q9NTI2 1148 aa23.89■■□□□ 1.42
TIMP4-201ENST00000287814 MCM9Q9NXL9 1143 aa23.89■■□□□ 1.42
TIMP4-201ENST00000287814 SIPA1L1O43166 1804 aa23.89■■□□□ 1.41
TIMP4-201ENST00000287814 GJA5P36382 358 aa23.89■■□□□ 1.41
TIMP4-201ENST00000287814 NOGQ13253 232 aa23.89■■□□□ 1.41
TIMP4-201ENST00000287814 RRP1BQ14684 758 aaKnown RBP23.89■■□□□ 1.41
TIMP4-201ENST00000287814 CCDC129Q6ZRS4 1044 aa23.89■■□□□ 1.41
TIMP4-201ENST00000287814 A0A0D9SFI3 127 aa23.88■■□□□ 1.41
TIMP4-201ENST00000287814 GSG1L2A8MUP6 293 aa23.88■■□□□ 1.41
TIMP4-201ENST00000287814 CYP2D6P10635 497 aa23.88■■□□□ 1.41
TIMP4-201ENST00000287814 SDSP20132 328 aa23.88■■□□□ 1.41
TIMP4-201ENST00000287814 SPRYD7Q5W111 196 aa23.88■■□□□ 1.41
TIMP4-201ENST00000287814 FOXP4Q8IVH2 680 aaPredicted RBP23.88■■□□□ 1.41
TIMP4-201ENST00000287814 CSADQ9Y600 493 aa23.88■■□□□ 1.41
TIMP4-201ENST00000287814 SMIM22K7EJ46 135 aa23.87■■□□□ 1.41
TIMP4-201ENST00000287814 MAP2K2P36507 400 aa23.87■■□□□ 1.41
TIMP4-201ENST00000287814 KIF23Q02241 960 aaPredicted RBP23.87■■□□□ 1.41
TIMP4-201ENST00000287814 NMIQ13287 307 aaPredicted RBP23.87■■□□□ 1.41
TIMP4-201ENST00000287814 WNK4Q96J92 1243 aa23.87■■□□□ 1.41
TIMP4-201ENST00000287814 POLR3DP05423 398 aaPredicted RBP23.86■■□□□ 1.41
TIMP4-201ENST00000287814 HLA-DOAP06340 250 aa23.86■■□□□ 1.41
TIMP4-201ENST00000287814 TICAM2Q86XR7 235 aa23.86■■□□□ 1.41
TIMP4-201ENST00000287814 OPTNQ96CV9 577 aa23.86■■□□□ 1.41
TIMP4-201ENST00000287814 HERC5Q9UII4 1024 aaKnown RBP23.86■■□□□ 1.41
TIMP4-201ENST00000287814 DDX60LQ5H9U9 1706 aaKnown RBP23.86■■□□□ 1.41
TIMP4-201ENST00000287814 MYH1P12882 1939 aa23.86■■□□□ 1.41
TIMP4-201ENST00000287814 TTC6Q86TZ1 520 aa23.86■■□□□ 1.41
TIMP4-201ENST00000287814 EPB41L4AQ9HCS5 686 aaPredicted RBP23.86■■□□□ 1.41
TIMP4-201ENST00000287814 HELLSQ9NRZ9 838 aa23.86■■□□□ 1.41
TIMP4-201ENST00000287814 CYP2D7A0A087X1C5 515 aa23.85■■□□□ 1.41
TIMP4-201ENST00000287814 USP17L12C9JPN9 530 aa23.85■■□□□ 1.41
TIMP4-201ENST00000287814 USP17L21D6R901 530 aa23.85■■□□□ 1.41
TIMP4-201ENST00000287814 NOL9Q5SY16 702 aaKnown RBP23.85■■□□□ 1.41
TIMP4-201ENST00000287814 THSD7BQ9C0I4 1608 aa23.84■■□□□ 1.41
TIMP4-201ENST00000287814 FOXP2O15409 715 aa23.84■■□□□ 1.41
TIMP4-201ENST00000287814 CRACR2BQ8N4Y2 399 aaPredicted RBP23.84■■□□□ 1.41
TIMP4-201ENST00000287814 EHD4Q9H223 541 aa23.84■■□□□ 1.41
TIMP4-201ENST00000287814 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.84■■□□□ 1.41
TIMP4-201ENST00000287814 SERPINB13Q9UIV8 391 aa23.84■■□□□ 1.41
TIMP4-201ENST00000287814 NAV1Q8NEY1 1877 aa23.84■■□□□ 1.41
TIMP4-201ENST00000287814 SPDYE5A6NIY4 337 aa23.83■■□□□ 1.41
TIMP4-201ENST00000287814 PATL2C9JE40 543 aaKnown RBP23.83■■□□□ 1.41
TIMP4-201ENST00000287814 CTNND1O60716 968 aaKnown RBP23.83■■□□□ 1.41
TIMP4-201ENST00000287814 JAG1P78504 1218 aa23.83■■□□□ 1.41
TIMP4-201ENST00000287814 GABPAQ06546 454 aa23.83■■□□□ 1.41
TIMP4-201ENST00000287814 MCMDC2Q4G0Z9 681 aa23.83■■□□□ 1.41
TIMP4-201ENST00000287814 CTR9Q6PD62 1173 aa23.83■■□□□ 1.41
TIMP4-201ENST00000287814 ZNF589Q86UQ0 364 aaPredicted RBP23.83■■□□□ 1.41
TIMP4-201ENST00000287814 OTUD5Q96G74 571 aa23.83■■□□□ 1.41
TIMP4-201ENST00000287814 GNAT2P19087 354 aa23.83■■□□□ 1.4
TIMP4-201ENST00000287814 SHROOM1Q2M3G4 852 aaPredicted RBP23.83■■□□□ 1.4
TIMP4-201ENST00000287814 C12orf60Q5U649 245 aa23.83■■□□□ 1.4
TIMP4-201ENST00000287814 VPS53Q5VIR6 699 aa23.83■■□□□ 1.4
TIMP4-201ENST00000287814 ERO1BQ86YB8 467 aa23.83■■□□□ 1.4
TIMP4-201ENST00000287814 SCYL3Q8IZE3 742 aa23.83■■□□□ 1.4
TIMP4-201ENST00000287814 ZBTB48P10074 688 aaPredicted RBP23.82■■□□□ 1.4
TIMP4-201ENST00000287814 CAP2P40123 477 aa23.82■■□□□ 1.4
TIMP4-201ENST00000287814 DYNLL2Q96FJ2 89 aa23.82■■□□□ 1.4
TIMP4-201ENST00000287814 BAZ2AQ9UIF9 1905 aaKnown RBP23.82■■□□□ 1.4
TIMP4-201ENST00000287814 APPP05067 770 aa23.81■■□□□ 1.4
TIMP4-201ENST00000287814 GIMAP6Q6P9H5 292 aa23.81■■□□□ 1.4
TIMP4-201ENST00000287814 CWC27Q6UX04 472 aaKnown RBP23.81■■□□□ 1.4
TIMP4-201ENST00000287814 CCDC84Q86UT8 332 aaPredicted RBP23.81■■□□□ 1.4
TIMP4-201ENST00000287814 IFNL3Q8IZI9 196 aa23.81■■□□□ 1.4
TIMP4-201ENST00000287814 WBP1LQ9NX94 342 aa23.81■■□□□ 1.4
TIMP4-201ENST00000287814 PTPRAP18433 802 aa23.8■■□□□ 1.4
TIMP4-201ENST00000287814 TATDN1Q6P1N9 297 aa23.8■■□□□ 1.4
TIMP4-201ENST00000287814 SLC44A5Q8NCS7 719 aa23.8■■□□□ 1.4
TIMP4-201ENST00000287814 DDRGK1Q96HY6 314 aa23.8■■□□□ 1.4
TIMP4-201ENST00000287814 TRIM34Q9BYJ4 488 aa23.8■■□□□ 1.4
TIMP4-201ENST00000287814 DIAPH3Q9NSV4 1193 aa23.8■■□□□ 1.4
TIMP4-201ENST00000287814 IRF6O14896 467 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 SHMT1P34896 483 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 MS4A4AQ96JQ5 239 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 IL25Q9H293 177 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 GDF11O95390 407 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 MAP2K1Q02750 393 aaPredicted RBP23.79■■□□□ 1.4
TIMP4-201ENST00000287814 PPATQ06203 517 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 SBK1Q52WX2 424 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 PICK1Q9NRD5 415 aa23.79■■□□□ 1.4
TIMP4-201ENST00000287814 TDO2P48775 406 aa23.78■■□□□ 1.4
TIMP4-201ENST00000287814 ARPP21Q9UBL0 812 aaPredicted RBP23.78■■□□□ 1.4
TIMP4-201ENST00000287814 HIP1O00291 1037 aa23.77■■□□□ 1.4
TIMP4-201ENST00000287814 TM4SF4P48230 202 aa23.77■■□□□ 1.4
TIMP4-201ENST00000287814 PPIL2Q13356 520 aa23.77■■□□□ 1.4
TIMP4-201ENST00000287814 ZHX2Q9Y6X8 837 aa23.77■■□□□ 1.4
TIMP4-201ENST00000287814 CCDC171Q6TFL3 1326 aa23.77■■□□□ 1.4
TIMP4-201ENST00000287814 MINDY4BA8MYZ0 360 aa23.76■■□□□ 1.39
TIMP4-201ENST00000287814 HSPA1AP0DMV8 641 aaKnown RBP23.76■■□□□ 1.39
TIMP4-201ENST00000287814 HSPA1BP0DMV9 641 aaKnown RBP23.76■■□□□ 1.39
TIMP4-201ENST00000287814 CHMLP26374 656 aa23.76■■□□□ 1.39
TIMP4-201ENST00000287814 MANSC4A6NHS7 340 aaPredicted RBP23.76■■□□□ 1.39
TIMP4-201ENST00000287814 HSPD1P10809 573 aaKnown RBP23.76■■□□□ 1.39
TIMP4-201ENST00000287814 PTPN18Q99952 460 aa23.76■■□□□ 1.39
TIMP4-201ENST00000287814 NACAP1Q9BZK3 213 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms