RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
NSMCE2-201ENST00000287437 A0A0C4DFX4 3053 aa13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 HMGCRP04035 888 aa13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 TRIM32Q13049 653 aa13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 SPP2Q13103 211 aa13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 GDF15Q99988 308 aa13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
NSMCE2-201ENST00000287437 SYN1P17600 705 aa13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 HMGCS2P54868 508 aa13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 RHBDL3P58872 404 aa13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 TIMM10P62072 90 aa13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 MECOMQ03112 1051 aa13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 SMC4Q9NTJ3 1288 aa13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 PDS5AQ29RF7 1337 aaKnown RBP13.32□□□□□ -0.28
NSMCE2-201ENST00000287437 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 E9PSI1 815 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 TBC1D12O60347 775 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 BMP8BP34820 402 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 GCLCP48506 637 aaPredicted RBP13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 SPTY2D1Q68D10 685 aaPredicted RBP13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 ERICH6Q7L0X2 663 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 ANKLE1Q8NAG6 615 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 ZNF280CQ8ND82 737 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 OSBPL5Q9H0X9 879 aaPredicted RBP13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 ASCC2Q9H1I8 757 aaPredicted RBP13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 HMX1Q9NP08 348 aaPredicted RBP13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 COPRSQ9NQ92 184 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 GJD2Q9UKL4 321 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 RPTORQ8N122 1335 aa13.31□□□□□ -0.28
NSMCE2-201ENST00000287437 LOC285556D6RIA3 1793 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 ALDH1L2Q3SY69 923 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 Q7L0L9 218 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 DEFB123Q8N688 67 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 TRIB2Q92519 343 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 XAGE2Q96GT9 111 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 NBPF3Q9H094 633 aa13.3□□□□□ -0.28
NSMCE2-201ENST00000287437 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 PEX10O60683 326 aa13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 CAP2P40123 477 aa13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 TFCP2Q12800 502 aa13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 PABPC4Q13310 644 aaKnown RBP eCLIP13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 C11orf49Q9H6J7 331 aa13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.29□□□□□ -0.28
NSMCE2-201ENST00000287437 DDX60LQ5H9U9 1706 aaKnown RBP13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 CYP2B6P20813 491 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 GPR153Q6NV75 609 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 TBC1D9Q6ZT07 1266 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 NSUN4Q96CB9 384 aaKnown RBP13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 MEIS3Q99687 375 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 OGDHLQ9ULD0 1010 aa13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 COL2A1P02458 1487 aaPredicted RBP13.28□□□□□ -0.28
NSMCE2-201ENST00000287437 IRX3P78415 501 aaPredicted RBP13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 GSTO1P78417 241 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 MTMR2Q13614 643 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 SPATA5Q8NB90 893 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 CDCA7LQ96GN5 454 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 NEUROD6Q96NK8 337 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 TBC1D2Q9BYX2 928 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 AS3MTQ9HBK9 375 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 RAI14Q9P0K7 980 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 MORF4L1Q9UBU8 362 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 AKAP2Q9Y2D5 859 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 PFASO15067 1338 aa13.27□□□□□ -0.29
NSMCE2-201ENST00000287437 PLXNB2O15031 1838 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 SRGAP3O43295 1099 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 LDHCP07864 332 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 SH3RF3Q8TEJ3 882 aaPredicted RBP13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 ATAD5Q96QE3 1844 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 UBE2OQ9C0C9 1292 aaKnown RBP13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 TXNRD2Q9NNW7 524 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
NSMCE2-201ENST00000287437 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 JAG1P78504 1218 aa13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 SHROOM1Q2M3G4 852 aaPredicted RBP13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 GORABQ5T7V8 394 aa13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 SOCS4Q8WXH5 440 aa13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 P2RX7Q99572 595 aaKnown RBP13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 NUDT12Q9BQG2 462 aa13.25□□□□□ -0.29
NSMCE2-201ENST00000287437 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms