RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TRIM56Q9BRZ2 755 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 PAG1Q9NWQ8 432 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 CTTNBP2NLQ9P2B4 639 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 SETD1BQ9UPS6 1966 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 HNRNPCL2B2RXH8 293 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 HNRNPCL1O60812 293 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 NECAB1Q8N987 351 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 ESYT2A0FGR8 921 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 DKC1O60832 514 aaKnown RBP eCLIP9.67□□□□□ -0.864e-9■□□□□ 10.7
NIPBL-201ENST00000282516 STX17P56962 302 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 STK38LQ9Y2H1 464 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 RIPOR2Q9Y4F9 1068 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 RNF8O76064 485 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 BCRP11274 1271 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 MAN1A1P33908 653 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 POMGNT1Q8WZA1 660 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 RIC8AQ9NPQ8 531 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 IPO11Q9UI26 975 aaKnown RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 PEX26Q7Z412 305 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 MORC4Q8TE76 937 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 TTC4O95801 387 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 HSPA8P11142 646 aaKnown RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 RAP1GDS1P52306 607 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 SLC9C1Q4G0N8 1177 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 NXNQ6DKJ4 435 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 MYCBPQ99417 103 aaPredicted RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 IL16Q14005 1332 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 TTC41PQ6P2S7 1318 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 PICALMQ13492 652 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 ANKRD20A4Q4UJ75 823 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 ANKRD20A8PQ5CZ79 823 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 ANKRD20A2Q5SQ80 823 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 ANKRD20A1Q5TYW2 823 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 LRGUKQ96M69 825 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 LRRC2Q9BYS8 371 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 HGSO14964 777 aaPredicted RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 SESN3P58005 492 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 TRIM31Q9BZY9 425 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 RSAD2Q8WXG1 361 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 FNBP4Q8N3X1 1017 aaPredicted RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 HOMER3Q9NSC5 361 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 TTLL3Q9Y4R7 772 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 RBM8AQ9Y5S9 174 aaKnown RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.66□□□□□ -0.869e-9■■□□□ 11.9
NIPBL-201ENST00000282516 VWA3AA6NCI4 1184 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 SYF2O95926 243 aaKnown RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 SERPINB6P35237 376 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 NLRP7Q8WX94 980 aa9.66□□□□□ -0.86
NIPBL-201ENST00000282516 SCHIP1Q9P0W5 487 aaPredicted RBP9.66□□□□□ -0.86
NIPBL-201ENST00000282516 NOP56O00567 594 aaKnown RBP9.65□□□□□ -0.86
NIPBL-201ENST00000282516 VEZTQ9HBM0 779 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 ITSN2Q9NZM3 1697 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 LCA5Q86VQ0 697 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
NIPBL-201ENST00000282516 PDZD4Q76G19 769 aaPredicted RBP9.65□□□□□ -0.86
NIPBL-201ENST00000282516 GRK7Q8WTQ7 553 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 TEKT2Q9UIF3 430 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
NIPBL-201ENST00000282516 TBC1D8BQ0IIM8 1120 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 KRT81Q14533 505 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 TSHZ3Q63HK5 1081 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 MX2P20592 715 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 HACE1Q8IYU2 909 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 RABEP2Q9H5N1 569 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 SFMBT2Q5VUG0 894 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 NRBF2Q96F24 287 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 NYXQ9GZU5 481 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 NUB1Q9Y5A7 615 aa9.65□□□□□ -0.86
NIPBL-201ENST00000282516 CCDC169A6NNP5 214 aa9.65□□□□□ -0.87
NIPBL-201ENST00000282516 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.87
NIPBL-201ENST00000282516 APOEP02649 317 aa9.65□□□□□ -0.87
NIPBL-201ENST00000282516 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.87
NIPBL-201ENST00000282516 IL15P40933 162 aaPredicted RBP9.65□□□□□ -0.87
NIPBL-201ENST00000282516 ESRRGP62508 458 aa9.65□□□□□ -0.87
NIPBL-201ENST00000282516 RPS6KA1Q15418 735 aa9.65□□□□□ -0.87
NIPBL-201ENST00000282516 TRIM50Q86XT4 487 aa9.65□□□□□ -0.87
NIPBL-201ENST00000282516 IFIH1Q9BYX4 1025 aaKnown RBP9.65□□□□□ -0.87
NIPBL-201ENST00000282516 CCDC68Q9H2F9 335 aa9.65□□□□□ -0.87
NIPBL-201ENST00000282516 TMTC1Q8IUR5 882 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 GRIN2BQ13224 1484 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 STAM2O75886 525 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 NONOQ15233 471 aaKnown RBP eCLIP9.64□□□□□ -0.87
NIPBL-201ENST00000282516 BSPRYQ5W0U4 402 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 ARHGEF35A5YM69 484 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 M0QZ92 97 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 SP4Q02446 784 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 MMEL1Q495T6 779 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 SND1Q7KZF4 910 aaKnown RBP eCLIP9.64□□□□□ -0.87
NIPBL-201ENST00000282516 MGARPQ8TDB4 240 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 CEP104O60308 925 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 PAK1Q13153 545 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 SNCBQ16143 134 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 SETDB2Q96T68 719 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 GPHNQ9NQX3 736 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-201ENST00000282516 BAIAP2L1Q9UHR4 511 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 ESYT1Q9BSJ8 1104 aa9.64□□□□□ -0.87
NIPBL-201ENST00000282516 CD2APQ9Y5K6 639 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms