RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 FBXL19Q6PCT2 694 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 DDX42Q86XP3 938 aaKnown RBP eCLIP3.55□□□□□ -1.84
HERC4-201ENST00000277817 ESYT1Q9BSJ8 1104 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 KBTBD4Q9NVX7 518 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 SCHIP1Q9P0W5 487 aaPredicted RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 USP47Q96K76 1375 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 KIF7Q2M1P5 1343 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 ZBED9Q6R2W3 1325 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 SHTN1A0MZ66 631 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 CD53P19397 219 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 MAPK8P45983 427 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 PROX2Q3B8N5 592 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 FAM102BQ5T8I3 360 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 PDXDC1Q6P996 788 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 CASC1Q6TDU7 716 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 SRPK1Q96SB4 655 aaKnown RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 SLKQ9H2G2 1235 aaPredicted RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 PNNQ9H307 717 aaKnown RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 ANKRD50Q9ULJ7 1429 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 NSD2O96028 1365 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 SH3BP5O60239 455 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 SCGB1D2O95969 90 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 HSP90AB1P08238 724 aaKnown RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 MCCP23508 829 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 EIF4BP23588 611 aaKnown RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 PURAQ00577 322 aaKnown RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 PTCRAQ6ISU1 281 aaPredicted RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 NECAB2Q7Z6G3 386 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 FERMT3Q86UX7 667 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 VPS37DQ86XT2 251 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 KIFC2Q96AC6 838 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 RUNDC1Q96C34 613 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 ORAI3Q9BRQ5 295 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 OSBPL3Q9H4L5 887 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 FAM8A1Q9UBU6 413 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 A0A1B0GUL6 1792 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 RGPD2P0DJD1 1756 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 NINLQ9Y2I6 1382 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 TOM1O60784 492 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 GRNP28799 593 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 TOGARAM2Q6ZUX3 1019 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 PACS2Q86VP3 889 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 ATCAYQ86WG3 371 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 ITPRIPQ8IWB1 547 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 NKAPQ8N5F7 415 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 ENOX1Q8TC92 643 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 CHRDQ9H2X0 955 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 TAGLN3Q9UI15 199 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 ANAPC4Q9UJX5 808 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 FER1L6Q2WGJ9 1857 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 ALG1L2C9J202 215 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 SERPINB3P29508 390 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 Q3C1V9 767 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 ZDHHC1Q8WTX9 485 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 STRBPQ96SI9 672 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 TRIM8Q9BZR9 551 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 RWDD1Q9H446 243 aaPredicted RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 PTPRHQ9HD43 1115 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 GTF2IRD1Q9UHL9 959 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 USP19O94966 1318 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 AKAP10O43572 662 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 TNFRSF21O75509 655 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 INHAP05111 366 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 SCTRP47872 440 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 PRPF40BQ6NWY9 871 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 CBARPQ8N350 705 aaPredicted RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 ARMC2Q8NEN0 867 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 RHOBTB2Q9BYZ6 727 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 TSPAN10Q9H1Z9 355 aaPredicted RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 LHX6Q9UPM6 363 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 PTPN22Q9Y2R2 807 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 CD163L1Q9NR16 1453 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 ERBB3P21860 1342 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 KDM6AO15550 1401 aaPredicted RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 APAF1O14727 1248 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 TBX3O15119 743 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 IPO8O15397 1037 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 PDPK1O15530 556 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 PRPF3O43395 683 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 CFHP08603 1231 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 CDC27P30260 824 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 CRKP46108 304 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 BCAMP50895 628 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 RRP1P56182 461 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 GBX1Q14549 363 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 PI16Q6UXB8 463 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 HDGFL2Q7Z4V5 671 aaPredicted RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 ANKLE2Q86XL3 938 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 CNPY4Q8N129 248 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 MAGEB6Q8N7X4 407 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 NKX2-3Q8TAU0 364 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 CRBNQ96SW2 442 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 CHMP4BQ9H444 224 aaKnown RBP3.54□□□□□ -1.84
HERC4-201ENST00000277817 CACNA2D2Q9NY47 1150 aa3.54□□□□□ -1.84
HERC4-201ENST00000277817 CCDC7Q96M83 1385 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 C11orf95C9JLR9 678 aaPredicted RBP3.53□□□□□ -1.84
HERC4-201ENST00000277817 SMAPO00193 183 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 ZNF500O60304 480 aaPredicted RBP3.53□□□□□ -1.84
HERC4-201ENST00000277817 MICAL2O94851 1124 aa3.53□□□□□ -1.84
HERC4-201ENST00000277817 F2P00734 622 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms