RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 RTN2O75298 545 aa17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 TOP1P11387 765 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 UBE3BQ7Z3V4 1068 aa17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 PDILTQ8N807 584 aa17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 TRIM6Q9C030 488 aaPredicted RBP17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 ACBD3Q9H3P7 528 aa17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 RBM28Q9NW13 759 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 BPIFA3Q9BQP9 254 aa17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 CDC23Q9UJX2 597 aa17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 GRIN2DO15399 1336 aa17.88■□□□□ 0.45
CTDSP1-201ENST00000273062 ZKSCAN1P17029 563 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 RDXP35241 583 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 AARSP49588 968 aaKnown RBP eCLIP17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 IQCA1Q86XH1 822 aa17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 CHUKO15111 745 aa17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 A1BGP04217 495 aa17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 GGCXP38435 758 aa17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 ZNF483Q8TF39 744 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 TACO1Q9BSH4 297 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 ECHDC1Q9NTX5 307 aa17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 HPCAL4Q9UM19 191 aa17.87■□□□□ 0.45
CTDSP1-201ENST00000273062 SLC27A2O14975 620 aa17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 IL2RBP14784 551 aa17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 G3BP1Q13283 466 aaKnown RBP eCLIP17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 ZBTB12Q9Y330 459 aaPredicted RBP17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 GLRX3O76003 335 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 PCDHA7Q9UN72 937 aa17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 ABCA3Q99758 1704 aa17.86■□□□□ 0.45
CTDSP1-201ENST00000273062 POTEB2H3BUK9 544 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 EVA1CP58658 441 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 FAM227BQ96M60 508 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 IRX1P78414 480 aaPredicted RBP17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 GUCY1B3Q02153 619 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 BLOC1S2Q6QNY1 142 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 GSPT2Q8IYD1 628 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 CEP112Q8N8E3 955 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 TATDN2Q93075 761 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 PARP4Q9UKK3 1724 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 AGPSO00116 658 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 ABL1P00519 1130 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 RPS6KB1P23443 525 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 CALRP27797 417 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 SEC62Q99442 399 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 CENPHQ9H3R5 247 aa17.85■□□□□ 0.45
CTDSP1-201ENST00000273062 A0A087WZG4 1122 aa17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 GOLGA6L9A6NEM1 432 aa17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 SOWAHDA6NJG2 315 aa17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 GRIK3Q13003 919 aa17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 ILDR1Q86SU0 546 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 MRPS27Q92552 414 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 DDX20Q9UHI6 824 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 RBM5P52756 815 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■□□□ 12.2
CTDSP1-201ENST00000273062 WLSQ5T9L3 541 aa17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 POLD4Q9HCU8 107 aa17.84■□□□□ 0.45
CTDSP1-201ENST00000273062 ARFGEF2Q9Y6D5 1785 aa17.83■□□□□ 0.45
CTDSP1-201ENST00000273062 ZMYND10O75800 440 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 AP1G2O75843 785 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 PDHBP11177 359 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 MRPL12P52815 198 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 NLRP12P59046 1061 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 CRYMQ14894 314 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 CEP57Q86XR8 500 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 FMNL3Q8IVF7 1028 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 EIF3HO15372 352 aaKnown RBP eCLIP17.83■□□□□ 0.445e-6■□□□□ 8.9
CTDSP1-201ENST00000273062 CLNS1AP54105 237 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 GNGT1P63211 74 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 KIF4BQ2VIQ3 1234 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 FAM76AQ8TAV0 307 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 THOC1Q96FV9 657 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 BOLA2Q9H3K6 86 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 ZBTB3Q9H5J0 574 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
CTDSP1-201ENST00000273062 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 SHANK3Q9BYB0 1731 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 ANKRD33BA6NCL7 494 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 MPHOSPH10O00566 681 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 FSBPO95073 299 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 ERCC3P19447 782 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 ZNF569Q5MCW4 686 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 NCAPH2Q6IBW4 605 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 EDC3Q96F86 508 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 KLC4Q9NSK0 619 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 STX10O60499 249 aa17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 SLC3A2P08195 630 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 AKAP17AQ02040 695 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTDSP1-201ENST00000273062 GOLGA6CA6NDK9 693 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 GOLGA6DP0CG33 693 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 PARD3BQ8TEW8 1205 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 CDC5LQ99459 802 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 CAPS2Q9BXY5 557 aa17.81■□□□□ 0.44
CTDSP1-201ENST00000273062 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms