RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 EXOC6BQ9Y2D4 811 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 ANKRD20A3Q5VUR7 823 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 EP400NLQ6ZTU2 488 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 NDE1Q9NXR1 346 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 DENND2CQ68D51 928 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 CLEC17AQ6ZS10 378 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 HOOK2Q96ED9 719 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 METTL14Q9HCE5 456 aaKnown RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SAR1BQ9Y6B6 198 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 PLEKHG1Q9ULL1 1385 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SDSP20132 328 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 EPHB4P54760 987 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 NLRP12P59046 1061 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 RIPPLY1Q0D2K3 151 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 IDEP14735 1019 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 EEF1GP26641 437 aaKnown RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 PRIM1P49642 420 aaKnown RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 ALG1Q9BT22 464 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 PLCH2O75038 1416 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 DNM2P50570 870 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 KIFC3Q9BVG8 833 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 NUTM2BA6NNL0 878 aaPredicted RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 NUTM2EB1AL46 878 aaPredicted RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 PFDN6O15212 129 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 CALUO43852 315 aaPredicted RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SUN1O94901 812 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 CAMK4Q16566 473 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 MIER3Q7Z3K6 550 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 AFAP1Q8N556 730 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 TMEM87AQ8NBN3 555 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 BRD1O95696 1058 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SSBP05455 408 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 ZHX3Q9H4I2 956 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 JRKLQ9Y4A0 524 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 RPAP1Q9BWH6 1393 aaPredicted RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 IDH1O75874 414 aaKnown RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 ESRRGP62508 458 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 BIRC3Q13489 604 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 KRT39Q6A163 491 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 IFNL2Q8IZJ0 200 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SCLT1Q96NL6 688 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 FRMD4BQ9Y2L6 1034 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 EPB41P11171 864 aaKnown RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SNCBQ16143 134 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 KRBA2Q6ZNG9 492 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 TTLL7Q6ZT98 887 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 VPS52Q8N1B4 723 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SATB2Q9UPW6 733 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 ADALQ6DHV7 355 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 TMCO5AQ8N6Q1 288 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 USP26Q9BXU7 913 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 MAST3O60307 1309 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 CUL1Q13616 776 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 CDC37Q16543 378 aaPredicted RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 KSR2Q6VAB6 950 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 AOPEPQ8N6M6 819 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 H7C1D1 291 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 IPO5O00410 1097 aaKnown RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 SLC26A4O43511 780 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 CEP104O60308 925 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 MKRN3Q13064 507 aaKnown RBP5.48□□□□□ -1.53
HMCN1-201ENST00000271588 MMS22LQ6ZRQ5 1243 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 BRF1Q92994 677 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 HYOU1Q9Y4L1 999 aa5.48□□□□□ -1.53
HMCN1-201ENST00000271588 MRPS25P82663 173 aaKnown RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 PDCD2Q16342 344 aaPredicted RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 ESCO1Q5FWF5 840 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 LZICQ8WZA0 190 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 OLFM3Q96PB7 478 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 FOSBP53539 338 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 IGSF22Q8N9C0 903 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 NECTIN2Q92692 538 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 CD109Q6YHK3 1445 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 SLC8A3P57103 927 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 NCBP1Q09161 790 aaKnown RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 DTHD1Q6ZMT9 781 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 TDRD7Q8NHU6 1098 aaKnown RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 ABCC1P33527 1531 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 TEDDM1Q5T9Z0 273 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 TMEM132EQ6IEE7 984 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 PROSER2Q86WR7 435 aaPredicted RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 ZNF830Q96NB3 372 aaPredicted RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 TMOD3Q9NYL9 352 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 EPS15L1Q9UBC2 864 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 ANGPTL3Q9Y5C1 460 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 ILF2Q12905 390 aaKnown RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 RRS1Q15050 365 aaKnown RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 PRDM11Q9NQV5 511 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 HACD3Q9P035 362 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 SYNRGQ9UMZ2 1314 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 UHRF1BP1LA0JNW5 1464 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 CFAP73A6NFT4 308 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 RPUSD2Q8IZ73 545 aaKnown RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 KIF9Q9HAQ2 790 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 RBM8AQ9Y5S9 174 aaKnown RBP5.47□□□□□ -1.53
HMCN1-201ENST00000271588 A0A1B0GW55 424 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 GIPC1O14908 333 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 DUX4L2P0CJ85 424 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 DUX4L3P0CJ86 424 aa5.47□□□□□ -1.53
HMCN1-201ENST00000271588 DUX4L4P0CJ87 422 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms