RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 SETDB1Q15047 1291 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 NONOQ15233 471 aaKnown RBP eCLIP11.42□□□□□ -0.58
LAMA3-201ENST00000269217 TUBB8Q3ZCM7 444 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 CSRNP2Q9H175 543 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 ZBTB21Q9ULJ3 1066 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 SSH3Q8TE77 659 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 LZTS2Q9BRK4 669 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 MROH5Q6ZUA9 1318 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 MAPK8IP1Q9UQF2 711 aa11.42□□□□□ -0.58
LAMA3-201ENST00000269217 GSPT1P15170 499 aaKnown RBP11.41□□□□□ -0.58
LAMA3-201ENST00000269217 ELF2Q15723 593 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 ME3Q16798 604 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 SLC9C1Q4G0N8 1177 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 PHKBQ93100 1093 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
LAMA3-201ENST00000269217 KRT9P35527 623 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 TXKP42681 527 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 B4GALNT4Q76KP1 1039 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 IFT20Q8IY31 132 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 GPR161Q8N6U8 529 aaKnown RBP11.41□□□□□ -0.58
LAMA3-201ENST00000269217 KIAA1524Q8TCG1 905 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.41□□□□□ -0.58
LAMA3-201ENST00000269217 SPOPO43791 374 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 SPATA5Q8NB90 893 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 TMEM87AQ8NBN3 555 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 NKIRAS1Q9NYS0 192 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 BACH1O14867 736 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 ZAP70P43403 619 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 CTDSPL2Q05D32 466 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 ADALQ6DHV7 355 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 ZNF274Q96GC6 653 aaPredicted RBP11.41□□□□□ -0.58
LAMA3-201ENST00000269217 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 TXNDC16Q9P2K2 825 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 ZNF532Q9HCE3 1301 aa11.41□□□□□ -0.58
LAMA3-201ENST00000269217 IGSF3O75054 1194 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 PRDM1O75626 825 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 CEP57Q86XR8 500 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 C17orf53Q8N3J3 647 aaPredicted RBP11.4□□□□□ -0.58
LAMA3-201ENST00000269217 CNBD1Q8NA66 436 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 MYL10Q9BUA6 226 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 LRWD1Q9UFC0 647 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 GNPATO15228 680 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 UFL1O94874 794 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 A1BGP04217 495 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 GABPB1Q06547 395 aaPredicted RBP11.4□□□□□ -0.58
LAMA3-201ENST00000269217 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 UTP14CQ5TAP6 766 aaKnown RBP11.4□□□□□ -0.58
LAMA3-201ENST00000269217 FNBP1Q96RU3 617 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 TAB2Q9NYJ8 693 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 MAST3O60307 1309 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 ALDH3A1P30838 453 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 IQCDQ96DY2 449 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 SMTNP53814 917 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 AKNAD1Q5T1N1 836 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 DPH6Q7L8W6 267 aa11.4□□□□□ -0.58
LAMA3-201ENST00000269217 UTP11Q9Y3A2 253 aaKnown RBP11.4□□□□□ -0.58
LAMA3-201ENST00000269217 NEURL1BA8MQ27 555 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 KRT5P13647 590 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 ADCY7P51828 1080 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 ZNF354CQ86Y25 554 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 SNX29Q8TEQ0 813 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 BTG4Q9NY30 223 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 TSKSQ9UJT2 592 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.59
LAMA3-201ENST00000269217 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.4□□□□□ -0.59
LAMA3-201ENST00000269217 MAGEA1P43355 309 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 MTX1Q13505 466 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 KRBA2Q6ZNG9 492 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 UBL4BQ8N7F7 174 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 NELFBQ8WX92 580 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 RASSF4Q9H2L5 321 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 KDRP35968 1356 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 ADGBQ8N7X0 1667 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 BIRC3Q13489 604 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 CROCCP2Q86T23 111 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 CCDC51Q96ER9 411 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 PSMD1Q99460 953 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 SWAP70Q9UH65 585 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 DISP1Q96F81 1524 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 CCDC14Q49A88 953 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 CCDC84Q86UT8 332 aaPredicted RBP11.39□□□□□ -0.59
LAMA3-201ENST00000269217 C10orf67Q8IYJ2 551 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 ZBTB9Q96C00 473 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 USP44Q9H0E7 712 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 AATFQ9NY61 560 aaKnown RBP eCLIP11.39□□□□□ -0.59
LAMA3-201ENST00000269217 TFCP2L1Q9NZI6 479 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 KCNJ14Q9UNX9 436 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 KAT6BQ8WYB5 2073 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 GOLGA6CA6NDK9 693 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 GOLGA6DP0CG33 693 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 INF2Q27J81 1249 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 FCHSD1Q86WN1 690 aa11.39□□□□□ -0.59
LAMA3-201ENST00000269217 ARHGEF10LQ9HCE6 1279 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms