RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 KRT15P19012 456 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 RNF34Q969K3 372 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 HAUS1Q96CS2 278 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 NRBF2Q96F24 287 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 IGSF22Q8N9C0 903 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 NYXQ9GZU5 481 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 FAM71BQ8TC56 605 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 HGSO14964 777 aaPredicted RBP13.4□□□□□ -0.26
SRRM4-201ENST00000267260 RFC4P35249 363 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 ANKRD20A4Q4UJ75 823 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 ANKRD20A8PQ5CZ79 823 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 ANKRD20A2Q5SQ80 823 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 ANKRD20A1Q5TYW2 823 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 BRF1Q92994 677 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 ASIC3Q9UHC3 531 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 TBC1D8O95759 1140 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 SDSP20132 328 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 TMED1Q13445 227 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.26
SRRM4-201ENST00000267260 NESP48681 1621 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
SRRM4-201ENST00000267260 MAN1A2O60476 641 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 BAG2O95816 211 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 KRT9P35527 623 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 CASC4Q6P4E1 433 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 RAB3GAP1Q15042 981 aa13.4□□□□□ -0.26
SRRM4-201ENST00000267260 TYW1Q9NV66 732 aaKnown RBP13.4□□□□□ -0.26
SRRM4-201ENST00000267260 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
SRRM4-201ENST00000267260 PFDN6O15212 129 aa13.4□□□□□ -0.27
SRRM4-201ENST00000267260 SESN3P58005 492 aa13.4□□□□□ -0.27
SRRM4-201ENST00000267260 F6X3S4 739 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 SERPINB6P35237 376 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 STRN3Q13033 797 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 SCHIP1Q9P0W5 487 aaPredicted RBP13.39□□□□□ -0.27
SRRM4-201ENST00000267260 SATB2Q9UPW6 733 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 CEP104O60308 925 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 CERS3Q8IU89 383 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 ZBTB9Q96C00 473 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 STX2P32856 288 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 ELF2Q15723 593 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 ZNF277Q9NRM2 450 aaPredicted RBP13.39□□□□□ -0.27
SRRM4-201ENST00000267260 PAG1Q9NWQ8 432 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 TRAF5O00463 557 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 TMTC1Q8IUR5 882 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
SRRM4-201ENST00000267260 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
SRRM4-201ENST00000267260 GNA14O95837 355 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 GOLGA5Q8TBA6 731 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 MRFAP1L1Q96HT8 127 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
SRRM4-201ENST00000267260 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
SRRM4-201ENST00000267260 ABTB1Q969K4 478 aaPredicted RBP13.38□□□□□ -0.27
SRRM4-201ENST00000267260 SH2D4AQ9H788 454 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 RGS16O15492 202 aaPredicted RBP13.38□□□□□ -0.27
SRRM4-201ENST00000267260 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 TBC1D8BQ0IIM8 1120 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 USP6NLQ92738 828 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 MRRFQ96E11 262 aaKnown RBP13.38□□□□□ -0.27
SRRM4-201ENST00000267260 CCDC68Q9H2F9 335 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 CDR2Q01850 454 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
SRRM4-201ENST00000267260 LMNB2Q03252 620 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 HOMER3Q9NSC5 361 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 HSPA8P11142 646 aaKnown RBP13.38□□□□□ -0.27
SRRM4-201ENST00000267260 P4HA1P13674 534 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 BIRC3Q13489 604 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 CENPKQ9BS16 269 aa13.38□□□□□ -0.27
SRRM4-201ENST00000267260 TEKT1Q969V4 418 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 KRT12Q99456 494 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 ARMC9Q7Z3E5 817 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 LRGUKQ96M69 825 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 SCAF11Q99590 1463 aaKnown RBP13.37□□□□□ -0.27
SRRM4-201ENST00000267260 TTC4O95801 387 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 IL15P40933 162 aaPredicted RBP13.37□□□□□ -0.27
SRRM4-201ENST00000267260 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
SRRM4-201ENST00000267260 CARD10Q9BWT7 1032 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 GRM8O00222 908 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 ATP2B3Q16720 1220 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 BRD3Q15059 726 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 KRT71Q3SY84 523 aa13.37□□□□□ -0.27
SRRM4-201ENST00000267260 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
SRRM4-201ENST00000267260 IGF1RP08069 1367 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 GPTP24298 496 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 CLTAP09496 248 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 DCUN1D2Q6PH85 259 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 IPO11Q9UI26 975 aaKnown RBP13.36□□□□□ -0.27
SRRM4-201ENST00000267260 PARP1P09874 1014 aaKnown RBP13.36□□□□□ -0.27
SRRM4-201ENST00000267260 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
SRRM4-201ENST00000267260 TRIM6Q9C030 488 aaPredicted RBP13.36□□□□□ -0.27
SRRM4-201ENST00000267260 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
SRRM4-201ENST00000267260 CCNT1O60563 726 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms