RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 RPAP1Q9BWH6 1393 aaPredicted RBP12.45□□□□□ -0.42
SYCP3-201ENST00000266743 PRUNE2Q8WUY3 3088 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 TRIM75PA6NK02 468 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 PEX10O60683 326 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 HMGCRP04035 888 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 PTPRAP18433 802 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 FASTKD5Q7L8L6 764 aaKnown RBP12.45□□□□□ -0.42
SYCP3-201ENST00000266743 MAFAQ8NHW3 353 aaPredicted RBP12.45□□□□□ -0.42
SYCP3-201ENST00000266743 HMX1Q9NP08 348 aaPredicted RBP12.45□□□□□ -0.42
SYCP3-201ENST00000266743 AFG3L2Q9Y4W6 797 aa12.45□□□□□ -0.42
SYCP3-201ENST00000266743 MYBBP1AQ9BQG0 1328 aaKnown RBP12.44□□□□□ -0.42
SYCP3-201ENST00000266743 A0A1B0GUL6 1792 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
SYCP3-201ENST00000266743 BEND3Q5T5X7 828 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 FAM109BQ6ICB4 259 aaPredicted RBP12.44□□□□□ -0.42
SYCP3-201ENST00000266743 TMC2Q8TDI7 906 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 TBC1D22AQ8WUA7 517 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 MYLIPQ8WY64 445 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 PICK1Q9NRD5 415 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 GJD2Q9UKL4 321 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 OGDHLQ9ULD0 1010 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 DAGLAQ9Y4D2 1042 aa12.44□□□□□ -0.42
SYCP3-201ENST00000266743 CYP2B6P20813 491 aa12.43□□□□□ -0.42
SYCP3-201ENST00000266743 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
SYCP3-201ENST00000266743 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
SYCP3-201ENST00000266743 SCYL3Q8IZE3 742 aa12.43□□□□□ -0.42
SYCP3-201ENST00000266743 TRIB2Q92519 343 aa12.43□□□□□ -0.42
SYCP3-201ENST00000266743 CHMP4AQ9BY43 222 aa12.43□□□□□ -0.42
SYCP3-201ENST00000266743 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
SYCP3-201ENST00000266743 CAPN2P17655 700 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 CAVIN4Q5BKX8 364 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 METTL24Q5JXM2 366 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 SH3BP5LQ7L8J4 393 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 MRIQ9BWK5 157 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
SYCP3-201ENST00000266743 GRM8O00222 908 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 COL6A1P12109 1028 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 TMEM92Q6UXU6 159 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 KAZALD1Q96I82 304 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 SEMA6BQ9H3T3 888 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 AGTPBP1Q9UPW5 1226 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 ATRNL1Q5VV63 1379 aa12.41□□□□□ -0.42
SYCP3-201ENST00000266743 MGAMO43451 1857 aa12.4□□□□□ -0.42
SYCP3-201ENST00000266743 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.42
SYCP3-201ENST00000266743 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
SYCP3-201ENST00000266743 PRDX5P30044 214 aa12.4□□□□□ -0.42
SYCP3-201ENST00000266743 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.42
SYCP3-201ENST00000266743 FAM110CQ1W6H9 321 aa12.4□□□□□ -0.42
SYCP3-201ENST00000266743 TTYH1Q9H313 450 aaPredicted RBP12.4□□□□□ -0.42
SYCP3-201ENST00000266743 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
SYCP3-201ENST00000266743 MAST3O60307 1309 aa12.39□□□□□ -0.43
SYCP3-201ENST00000266743 MROH5Q6ZUA9 1318 aa12.39□□□□□ -0.43
SYCP3-201ENST00000266743 DDTLA6NHG4 134 aaPredicted RBP12.39□□□□□ -0.43
SYCP3-201ENST00000266743 RGS3P49796 1198 aa12.39□□□□□ -0.43
SYCP3-201ENST00000266743 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
SYCP3-201ENST00000266743 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
SYCP3-201ENST00000266743 VGLL2Q8N8G2 317 aa12.39□□□□□ -0.43
SYCP3-201ENST00000266743 C9orf78Q9NZ63 289 aaPredicted RBP12.39□□□□□ -0.43
SYCP3-201ENST00000266743 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
SYCP3-201ENST00000266743 COL2A1P02458 1487 aaPredicted RBP12.39□□□□□ -0.43
SYCP3-201ENST00000266743 CACNB2Q08289 660 aaPredicted RBP12.38□□□□□ -0.43
SYCP3-201ENST00000266743 SHHQ15465 462 aa12.38□□□□□ -0.43
SYCP3-201ENST00000266743 CCL14Q16627 93 aa12.38□□□□□ -0.43
SYCP3-201ENST00000266743 MAP3K21Q5TCX8 1036 aa12.38□□□□□ -0.43
SYCP3-201ENST00000266743 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
SYCP3-201ENST00000266743 USP38Q8NB14 1042 aa12.38□□□□□ -0.43
SYCP3-201ENST00000266743 LBHD1Q9BQE6 289 aaPredicted RBP12.38□□□□□ -0.43
SYCP3-201ENST00000266743 SUGT1Q9Y2Z0 365 aa12.38□□□□□ -0.43
SYCP3-201ENST00000266743 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
SYCP3-201ENST00000266743 C2orf72A6NCS6 295 aa12.37□□□□□ -0.43
SYCP3-201ENST00000266743 PDE8BO95263 885 aa12.37□□□□□ -0.43
SYCP3-201ENST00000266743 NBPF7P0C2Y1 421 aaPredicted RBP12.37□□□□□ -0.43
SYCP3-201ENST00000266743 ZEB1P37275 1124 aaPredicted RBP12.37□□□□□ -0.43
SYCP3-201ENST00000266743 HMGCS2P54868 508 aa12.37□□□□□ -0.43
SYCP3-201ENST00000266743 SPP2Q13103 211 aa12.37□□□□□ -0.43
SYCP3-201ENST00000266743 DDX10Q13206 875 aaKnown RBP12.37□□□□□ -0.43
SYCP3-201ENST00000266743 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
SYCP3-201ENST00000266743 SENP6Q9GZR1 1112 aaPredicted RBP12.37□□□□□ -0.43
SYCP3-201ENST00000266743 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
SYCP3-201ENST00000266743 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
SYCP3-201ENST00000266743 DDX4Q9NQI0 724 aaKnown RBP12.37□□□□□ -0.43
SYCP3-201ENST00000266743 FOSL2P15408 326 aa12.36□□□□□ -0.43
SYCP3-201ENST00000266743 PICALMQ13492 652 aa12.36□□□□□ -0.43
SYCP3-201ENST00000266743 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
SYCP3-201ENST00000266743 TNFRSF10AO00220 468 aa12.35□□□□□ -0.43
SYCP3-201ENST00000266743 ST18O60284 1047 aa12.35□□□□□ -0.43
SYCP3-201ENST00000266743 CTNND1O60716 968 aaKnown RBP12.35□□□□□ -0.43
SYCP3-201ENST00000266743 VAMP4O75379 141 aa12.35□□□□□ -0.43
SYCP3-201ENST00000266743 FGFR2P21802 821 aa12.35□□□□□ -0.43
SYCP3-201ENST00000266743 RRP1BQ14684 758 aaKnown RBP12.35□□□□□ -0.43
SYCP3-201ENST00000266743 ANKRD44Q8N8A2 993 aa12.35□□□□□ -0.43
SYCP3-201ENST00000266743 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
SYCP3-201ENST00000266743 TXNRD2Q9NNW7 524 aa12.35□□□□□ -0.43
SYCP3-201ENST00000266743 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms