RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 USP37Q86T82 979 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 TBC1D5Q92609 795 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 IFIH1Q9BYX4 1025 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 NKIRAS1Q9NYS0 192 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 PAK1Q13153 545 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 ALDH8A1Q9H2A2 487 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 CNNM4Q6P4Q7 775 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 KIF2CQ99661 725 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 IGHMBP2P38935 993 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 RAB3IPQ96QF0 476 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-201ENST00000264709 ATP5JP18859 108 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 KRT2P35908 639 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 PAF1Q8N7H5 531 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 TCEANC2Q96MN5 208 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 UTP11Q9Y3A2 253 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 SEMA3EO15041 775 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 CAPZA3Q96KX2 299 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 PALD1Q9ULE6 856 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 CHUKO15111 745 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 SEMA3FQ13275 785 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 STARD3NLO95772 234 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 KRT9P35527 623 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 RAB17Q9H0T7 212 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 IKBKGQ9Y6K9 419 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 TARSL2A2RTX5 802 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 WHAMMQ8TF30 809 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 ODF2LQ9ULJ1 636 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 KIF3CO14782 793 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 GSDMAQ96QA5 445 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 MTX1Q13505 466 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 TBC1D31Q96DN5 1066 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 FEZ2Q9UHY8 353 aaPredicted RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 STAMBPO95630 424 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 EEF1GP26641 437 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 SMC6Q96SB8 1091 aa13.06□□□□□ -0.32
DNMT3A-201ENST00000264709 CALCOCO2Q13137 446 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 GOLGA4Q13439 2230 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 KDRP35968 1356 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 RNF40O75150 1001 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 HOMER3Q9NSC5 361 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 FAM184BQ9ULE4 1060 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 PARP2Q9UGN5 583 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 SUDS3Q9H7L9 328 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 FLOT1O75955 427 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 SREK1Q8WXA9 508 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 NLRP5P59047 1200 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 GLE1Q53GS7 698 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 HIP1RO75146 1068 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.05□□□□□ -0.321e-8■■■■■ 65.4
DNMT3A-201ENST00000264709 MTUS1Q9ULD2 1270 aa13.05□□□□□ -0.32
DNMT3A-201ENST00000264709 CCDC174Q6PII3 467 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 CARMIL3Q8ND23 1372 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 STMN2Q93045 179 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 DNM2P50570 870 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 PCDHA7Q9UN72 937 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 PFKFB1P16118 471 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 GCKP35557 465 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 TADA3O75528 432 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 SEPT11Q9NVA2 429 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 SLC39A14Q15043 492 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 SLC9C1Q4G0N8 1177 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 CCDC110Q8TBZ0 833 aa13.04□□□□□ -0.32
DNMT3A-201ENST00000264709 A0A1W2PRG0 241 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 AFMP43652 599 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 HNRNPLLQ8WVV9 542 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 CASP8Q14790 479 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 SRLQ86TD4 932 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 GNA11P29992 359 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 PCK1P35558 622 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 MAP7Q14244 749 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 ZDHHC9Q9Y397 364 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 CCDC169A6NNP5 214 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 ASIC1P78348 528 aa13.03□□□□□ -0.32
DNMT3A-201ENST00000264709 C19orf44Q9H6X5 657 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms