RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 CSRNP1Q96S65 589 aa18.32■□□□□ 0.52
USP13-201ENST00000263966 SAP30BPQ9UHR5 308 aaKnown RBP18.32■□□□□ 0.52
USP13-201ENST00000263966 BBS5Q8N3I7 341 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 ITKQ08881 620 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 BRAPQ7Z569 592 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 Q6ZUG5 572 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
USP13-201ENST00000263966 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
USP13-201ENST00000263966 ERCC3P19447 782 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 ZBTB8OSQ8IWT0 167 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 GSTA1P08263 222 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 GSTA2P09210 222 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 IRX4P78413 519 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 KIAA1841Q6NSI8 718 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 GADL1Q6ZQY3 521 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 SDCCAG3Q96C92 435 aa18.31■□□□□ 0.52
USP13-201ENST00000263966 DNM3Q9UQ16 869 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 PRPSAP1Q14558 356 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 PARP10Q53GL7 1025 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 ITM2BQ9Y287 266 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 MCM6Q14566 821 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 FANCAO15360 1455 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 AKAP4Q5JQC9 854 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 DLGAP5Q15398 846 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 MRPL44Q9H9J2 332 aaKnown RBP18.3■□□□□ 0.52
USP13-201ENST00000263966 MLXIPQ9HAP2 919 aa18.3■□□□□ 0.52
USP13-201ENST00000263966 FBXW4P57775 412 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
USP13-201ENST00000263966 MAIP1Q8WWC4 291 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 H0YCG3 227 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 SYT1P21579 422 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 TBC1D22AQ8WUA7 517 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 NCOA1Q15788 1441 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 SYCE1Q8N0S2 351 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 RSAD2Q8WXG1 361 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 TRIM14Q14142 442 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 ASIC2Q16515 512 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 LETM2Q2VYF4 491 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 MAN1A1P33908 653 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 COPS6Q7L5N1 327 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 GOLGA8QA0A0J9YX86 632 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 GOLGA8OA6NCC3 632 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 GOLGA8NF8WBI6 632 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 XPOTO43592 962 aaKnown RBP18.29■□□□□ 0.52
USP13-201ENST00000263966 ABCC5O15440 1437 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 CCNA1P78396 465 aa18.29■□□□□ 0.52
USP13-201ENST00000263966 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
USP13-201ENST00000263966 TLDC2A0PJX2 215 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 GCNT3O95395 438 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 ARHGAP4P98171 946 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 MCUR1Q96AQ8 359 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 PLCH2O75038 1416 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 NAA25Q14CX7 972 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 SLC12A6Q9UHW9 1150 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 SPTLC2O15270 562 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 PPFIA1Q13136 1202 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 SLFN5Q08AF3 891 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 CPXCR1Q8N123 301 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 PLCB1Q9NQ66 1216 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 EBAG9O00559 213 aa18.28■□□□□ 0.52
USP13-201ENST00000263966 RNASELQ05823 741 aaKnown RBP18.28■□□□□ 0.52
USP13-201ENST00000263966 TSTA3Q13630 321 aaPredicted RBP18.28■□□□□ 0.52
USP13-201ENST00000263966 ZYXQ15942 572 aaKnown RBP18.28■□□□□ 0.52
USP13-201ENST00000263966 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 TNNC2P02585 160 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 TNNI1P19237 187 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 MCTP2Q6DN12 878 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 CAPZA3Q96KX2 299 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 GUCA1BQ9UMX6 200 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 CD19P15391 556 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 AP5M1Q9H0R1 490 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 RABGAP1Q9Y3P9 1069 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 ARHGAP27Q6ZUM4 889 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■□□□ 12
USP13-201ENST00000263966 DEPTORQ8TB45 409 aa18.27■□□□□ 0.52
USP13-201ENST00000263966 RSRC1Q96IZ7 334 aaKnown RBP18.27■□□□□ 0.52
USP13-201ENST00000263966 PHBP35232 272 aa18.27■□□□□ 0.51
USP13-201ENST00000263966 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.51
USP13-201ENST00000263966 PUM3Q15397 648 aaKnown RBP18.27■□□□□ 0.51
USP13-201ENST00000263966 MYCT1Q8N699 235 aa18.27■□□□□ 0.51
USP13-201ENST00000263966 NCAPD3P42695 1498 aa18.27■□□□□ 0.51
USP13-201ENST00000263966 RFC1P35251 1148 aaPredicted RBP18.27■□□□□ 0.51
USP13-201ENST00000263966 PRKG1Q13976 671 aa18.27■□□□□ 0.51
USP13-201ENST00000263966 CALCRLQ16602 461 aa18.27■□□□□ 0.51
USP13-201ENST00000263966 EXOC8Q8IYI6 725 aa18.27■□□□□ 0.51
USP13-201ENST00000263966 PYGLP06737 847 aa18.26■□□□□ 0.51
USP13-201ENST00000263966 ZNF853P0CG23 659 aa18.26■□□□□ 0.51
USP13-201ENST00000263966 BACH2Q9BYV9 841 aa18.26■□□□□ 0.51
USP13-201ENST00000263966 PPIP5K2O43314 1243 aa18.26■□□□□ 0.51
USP13-201ENST00000263966 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
USP13-201ENST00000263966 ZSCAN22P10073 491 aaPredicted RBP18.26■□□□□ 0.51
USP13-201ENST00000263966 BRF1Q92994 677 aa18.26■□□□□ 0.51
USP13-201ENST00000263966 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.26■□□□□ 0.51
USP13-201ENST00000263966 DDX39AO00148 427 aaKnown RBP18.26■□□□□ 0.51
USP13-201ENST00000263966 NOC4LQ9BVI4 516 aaKnown RBP18.26■□□□□ 0.51
USP13-201ENST00000263966 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms