RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CEP126Q9P2H0 1117 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 WWC3Q9ULE0 1092 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 ABCC12Q96J65 1359 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 STK36Q9NRP7 1315 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 ATP5J2-PTCD1G3V325 749 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 PTCD1O75127 700 aaKnown RBP14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 PTPREP23469 700 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 RBL2Q08999 1139 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 SLC39A6Q13433 755 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 MTF1Q14872 753 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 HSP90AA4PQ58FG1 418 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 EFCAB13Q8IY85 973 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 IRX2Q9BZI1 471 aaPredicted RBP14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 JRKLQ9Y4A0 524 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 ZBTB43O43298 467 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 MFAP3LO75121 409 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 FECHP22830 423 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 AARSP49588 968 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 RILPL1Q5EBL4 403 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 NOSTRINQ8IVI9 506 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 THEMISQ8N1K5 641 aaPredicted RBP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 SAMSN1Q9NSI8 373 aaKnown RBP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 GEMIN8Q9NWZ8 242 aaKnown RBP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 ITIH6Q6UXX5 1313 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 SH2B2O14492 632 aaPredicted RBP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 POLR2DO15514 142 aaKnown RBP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 RHOXF2BP0C7M4 288 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 VSNL1P62760 191 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 SSRP1Q08945 709 aaKnown RBP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 DNAJC21Q5F1R6 531 aaKnown RBP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 LRRC31Q6UY01 552 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 AFAP1L1Q8TED9 768 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 RHOXF2Q9BQY4 288 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 SERTAD1Q9UHV2 236 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 FBXO3Q9UK99 471 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 ADAMTS7Q9UKP4 1686 aa14.07□□□□□ -0.16
CHMP2B-201ENST00000263780 TRIM14Q14142 442 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 SLC35F6Q8N357 371 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 SPATA20Q8TB22 786 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 CWC25Q9NXE8 425 aaPredicted RBP14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 FOXN1O15353 648 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 FOXP2O15409 715 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 N4BP1O75113 896 aaKnown RBP14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 GCP02774 474 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 KCNA6P17658 529 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 PBX1P40424 430 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 EIF5P55010 431 aaKnown RBP14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 TRMT44Q8IYL2 757 aaKnown RBP14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 AIFM3Q96NN9 605 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 TEX13AQ9BXU3 409 aaPredicted RBP14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 FAM204AQ9H8W3 233 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 MYO6Q9UM54 1294 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 TBC1D2BQ9UPU7 963 aa14.06□□□□□ -0.16
CHMP2B-201ENST00000263780 CPP00450 1065 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 GUCY2CP25092 1073 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 PIP4K2AP48426 406 aaPredicted RBP14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 SLC9C2Q5TAH2 1124 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 CYP26C1Q6V0L0 522 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 RPGRIP1Q96KN7 1286 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 ADD3Q9UEY8 706 aaKnown RBP14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 FBXO2Q9UK22 296 aaPredicted RBP14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 GOLGA8AA7E2F4 631 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 GPAA1O43292 621 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 NFXL1Q6ZNB6 911 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 STK11IPQ8N1F8 1099 aa14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 FOXP1Q9H334 677 aaPredicted RBP14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 SRPRBQ9Y5M8 271 aaKnown RBP14.05□□□□□ -0.16
CHMP2B-201ENST00000263780 A0A087WUV0 522 aaPredicted RBP14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 CPLX3Q8WVH0 158 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 RGPD2P0DJD1 1756 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 TEX33O43247 280 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 RNF40O75150 1001 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 SGMS1Q86VZ5 419 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 ANKRD20A12PQ8NF67 263 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 PHKBQ93100 1093 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 SYNRGQ9UMZ2 1314 aa14.04□□□□□ -0.16
CHMP2B-201ENST00000263780 TARSL2A2RTX5 802 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 ACTN4O43707 911 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 FMNL1O95466 1100 aaPredicted RBP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 SPAG1Q07617 926 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 NTRK3Q16288 839 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 APTXQ7Z2E3 356 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 SUGP1Q8IWZ8 645 aaKnown RBP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 TRIM22Q8IYM9 498 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 C4AP0C0L4 1744 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 C4BP0C0L5 1744 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 MMP1P03956 469 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 LRRC24Q50LG9 513 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 TAF7LQ5H9L4 462 aa14.03□□□□□ -0.16
CHMP2B-201ENST00000263780 PACS2Q86VP3 889 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms