RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZBTB22O15209 634 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 CDKL5O76039 1030 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 CSF1RP07333 972 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 EVX2Q03828 476 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 RESP18Q5W5W9 173 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 SPATA5Q8NB90 893 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 LRP2BPQ9P2M1 347 aa10.48□□□□□ -0.73
MSH4-201ENST00000263187 ABCC6O95255 1503 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 CPDO75976 1380 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 ETF1P62495 437 aaKnown RBP10.47□□□□□ -0.73
MSH4-201ENST00000263187 TEX35Q5T0J7 233 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 GIGYF2Q6Y7W6 1299 aaKnown RBP10.47□□□□□ -0.73
MSH4-201ENST00000263187 NOSTRINQ8IVI9 506 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
MSH4-201ENST00000263187 EPSTI1Q96J88 318 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 MPHOSPH8Q99549 860 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 ZCCHC17Q9NP64 241 aaKnown RBP10.47□□□□□ -0.73
MSH4-201ENST00000263187 MAN1B1Q9UKM7 699 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 SLFN14P0C7P3 912 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 SAFBQ15424 915 aaKnown RBP eCLIP10.47□□□□□ -0.73
MSH4-201ENST00000263187 HPSEQ9Y251 543 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 MORC2Q9Y6X9 1032 aaPredicted RBP10.47□□□□□ -0.73
MSH4-201ENST00000263187 RIC1Q4ADV7 1423 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 MAP3K15Q6ZN16 1313 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 NWD2Q9ULI1 1742 aa10.47□□□□□ -0.73
MSH4-201ENST00000263187 TEX33O43247 280 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 RTN1Q16799 776 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.73
MSH4-201ENST00000263187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.46□□□□□ -0.73
MSH4-201ENST00000263187 MAPK8IP1Q9UQF2 711 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 PLCH1Q4KWH8 1693 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 PIP4K2BP78356 416 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 WTAPQ15007 396 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 POSTNQ15063 836 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 DZIP3Q86Y13 1208 aaKnown RBP10.46□□□□□ -0.73
MSH4-201ENST00000263187 VSTM4Q8IW00 320 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 ACSBG1Q96GR2 724 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 BAG1Q99933 345 aaPredicted RBP10.46□□□□□ -0.73
MSH4-201ENST00000263187 CSRNP2Q9H175 543 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 TUBE1Q9UJT0 475 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 PPP2R2CQ9Y2T4 447 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 NRAPQ86VF7 1730 aa10.46□□□□□ -0.73
MSH4-201ENST00000263187 A0A0U1RQG5 324 aaPredicted RBP10.46□□□□□ -0.74
MSH4-201ENST00000263187 GSG1L2A8MUP6 293 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 WNT7AO00755 349 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 GYS2P54840 703 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 MAPK8IP2Q13387 824 aaPredicted RBP10.46□□□□□ -0.74
MSH4-201ENST00000263187 SYCP1Q15431 976 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 TRIM65Q6PJ69 517 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 EEF2KMTQ96G04 330 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 BPIFA3Q9BQP9 254 aa10.46□□□□□ -0.74
MSH4-201ENST00000263187 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 SOWAHDA6NJG2 315 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 PATL2C9JE40 543 aaKnown RBP10.45□□□□□ -0.74
MSH4-201ENST00000263187 CDC25AP30304 524 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 KCNQ4P56696 695 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 MAP3K12Q12852 859 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 ZNF174Q15697 407 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 AKNAD1Q5T1N1 836 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 ADGRA1Q86SQ6 560 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 TRIM22Q8IYM9 498 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 VGLL2Q8N8G2 317 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 SMARCE1Q969G3 411 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 BTG4Q9NY30 223 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 VWA3AA6NCI4 1184 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 IKBKBO14920 756 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 CUTAO60888 179 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 PPP6R2O75170 966 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 TTF1Q15361 905 aaPredicted RBP10.45□□□□□ -0.74
MSH4-201ENST00000263187 TERF2Q15554 542 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 CCDC24Q8N4L8 307 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 MED15Q96RN5 788 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 BLZF1Q9H2G9 400 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 RAI14Q9P0K7 980 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 CAMTA1Q9Y6Y1 1673 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.45□□□□□ -0.74
MSH4-201ENST00000263187 ERICH2A1L162 156 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 PSDA5PKW4 1024 aaPredicted RBP10.45□□□□□ -0.74
MSH4-201ENST00000263187 MMP1P03956 469 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 CCT6AP40227 531 aaKnown RBP10.45□□□□□ -0.74
MSH4-201ENST00000263187 UBE3CQ15386 1083 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 FBXL16Q8N461 479 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 UBAC1Q9BSL1 405 aa10.45□□□□□ -0.74
MSH4-201ENST00000263187 PUF60Q9UHX1 559 aaKnown RBP10.45□□□□□ -0.74
MSH4-201ENST00000263187 A0A087X0B3 334 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 CBFA2T2O43439 604 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 GYG1P46976 350 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 PUM3Q15397 648 aaKnown RBP10.44□□□□□ -0.74
MSH4-201ENST00000263187 ZFP91Q96JP5 570 aaPredicted RBP10.44□□□□□ -0.74
MSH4-201ENST00000263187 TMEM87BQ96K49 555 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 V9GY48 417 aaPredicted RBP10.44□□□□□ -0.74
MSH4-201ENST00000263187 LRP6O75581 1613 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 COL14A1Q05707 1796 aaKnown RBP10.44□□□□□ -0.74
MSH4-201ENST00000263187 NMT2O60551 498 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 CYP7A1P22680 504 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 CASQ1P31415 396 aa10.44□□□□□ -0.74
MSH4-201ENST00000263187 HSPA1LP34931 641 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms