RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SART3Q15020 963 aaKnown RBP26.9■■□□□ 1.9
SMARCB1-201ENST00000263121 SLC4A8Q2Y0W8 1093 aa26.9■■□□□ 1.9
SMARCB1-201ENST00000263121 SENP2Q9HC62 589 aa26.9■■□□□ 1.9
SMARCB1-201ENST00000263121 DDX4Q9NQI0 724 aaKnown RBP26.9■■□□□ 1.9
SMARCB1-201ENST00000263121 HPS5Q9UPZ3 1129 aa26.9■■□□□ 1.9
SMARCB1-201ENST00000263121 CXCL9Q07325 125 aa26.89■■□□□ 1.9
SMARCB1-201ENST00000263121 JDP2Q8WYK2 163 aa26.89■■□□□ 1.9
SMARCB1-201ENST00000263121 TNPO1Q92973 898 aaKnown RBP26.89■■□□□ 1.9
SMARCB1-201ENST00000263121 LLPHQ9BRT6 129 aaKnown RBP26.89■■□□□ 1.9
SMARCB1-201ENST00000263121 FHDC1Q9C0D6 1143 aaPredicted RBP26.89■■□□□ 1.9
SMARCB1-201ENST00000263121 ZDHHC9Q9Y397 364 aa26.89■■□□□ 1.9
SMARCB1-201ENST00000263121 GOLGA8BA8MQT2 603 aa26.89■■□□□ 1.89
SMARCB1-201ENST00000263121 RANBP6O60518 1105 aaKnown RBP26.89■■□□□ 1.89
SMARCB1-201ENST00000263121 RASSF7Q02833 373 aa26.89■■□□□ 1.89
SMARCB1-201ENST00000263121 DYNLL2Q96FJ2 89 aa26.89■■□□□ 1.89
SMARCB1-201ENST00000263121 ZKSCAN3Q9BRR0 538 aa26.89■■□□□ 1.89
SMARCB1-201ENST00000263121 NAP1L2Q9ULW6 460 aaPredicted RBP26.89■■□□□ 1.89
SMARCB1-201ENST00000263121 RBM5P52756 815 aaKnown RBP eCLIP26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 PICALMQ13492 652 aa26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 SEC23AQ15436 765 aa26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 NFKBIBQ15653 356 aa26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 APOA5Q6Q788 366 aa26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 AGBL3Q8NEM8 1001 aa26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 CHMP4CQ96CF2 233 aa26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 UBAC1Q9BSL1 405 aa26.88■■□□□ 1.89
SMARCB1-201ENST00000263121 CCT2P78371 535 aaKnown RBP26.87■■□□□ 1.89
SMARCB1-201ENST00000263121 CFAP100Q494V2 611 aa26.87■■□□□ 1.89
SMARCB1-201ENST00000263121 SMARCC2Q8TAQ2 1214 aa26.87■■□□□ 1.89
SMARCB1-201ENST00000263121 ERICH2A1L162 156 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 BRD1O95696 1058 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 PRELPP51888 382 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 WTAPQ15007 396 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 CIAPIN1Q6FI81 312 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 C16orf86Q6ZW13 317 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 ZSCAN10Q96SZ4 725 aaPredicted RBP26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 IDI2Q9BXS1 227 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 OSBPL5Q9H0X9 879 aaPredicted RBP26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 NCOA5Q9HCD5 579 aaKnown RBP26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 TNKSO95271 1327 aa26.86■■□□□ 1.89
SMARCB1-201ENST00000263121 DTNBO60941 627 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 CTDNEP1O95476 244 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 TMTC2Q8N394 836 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 NSUN7Q8NE18 718 aaKnown RBP26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 ZBTB12Q9Y330 459 aaPredicted RBP26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 JAK2O60674 1132 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 NPM3O75607 178 aaKnown RBP26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 NFIAQ12857 509 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 NFXL1Q6ZNB6 911 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 IQCA1Q86XH1 822 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 HDAC9Q9UKV0 1011 aa26.85■■□□□ 1.89
SMARCB1-201ENST00000263121 NID2Q14112 1375 aa26.84■■□□□ 1.89
SMARCB1-201ENST00000263121 CCDC69A6NI79 296 aa26.84■■□□□ 1.89
SMARCB1-201ENST00000263121 SYT1P21579 422 aa26.84■■□□□ 1.89
SMARCB1-201ENST00000263121 ENAHQ8N8S7 591 aaPredicted RBP26.84■■□□□ 1.89
SMARCB1-201ENST00000263121 FAM47AQ5JRC9 791 aa26.83■■□□□ 1.89
SMARCB1-201ENST00000263121 TTC6Q86TZ1 520 aa26.83■■□□□ 1.89
SMARCB1-201ENST00000263121 SLC44A5Q8NCS7 719 aa26.83■■□□□ 1.89
SMARCB1-201ENST00000263121 PRMT6Q96LA8 375 aaPredicted RBP26.83■■□□□ 1.89
SMARCB1-201ENST00000263121 MKNK2Q9HBH9 465 aa26.83■■□□□ 1.89
SMARCB1-201ENST00000263121 ZNF287Q9HBT7 754 aa26.83■■□□□ 1.89
SMARCB1-201ENST00000263121 ZBTB43O43298 467 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 CDK8P49336 464 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 TNIP1Q15025 636 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 CLEC17AQ6ZS10 378 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 OGFOD1Q8N543 542 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 SLC12A7Q9Y666 1083 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 SPDYE2BA6NHP3 402 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 TSPY2A6NKD2 308 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 DHX16O60231 1041 aaKnown RBP26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 SPDYE6P0CI01 402 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 RASA1P20936 1047 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 RCAN1P53805 252 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 GABPAQ06546 454 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 RAB11FIP4Q86YS3 637 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 FAM198AQ9UFP1 575 aa26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 WDR33Q9C0J8 1336 aaKnown RBP26.82■■□□□ 1.88
SMARCB1-201ENST00000263121 PTPDC1A2A3K4 754 aa26.81■■□□□ 1.88
SMARCB1-201ENST00000263121 FZD9O00144 591 aa26.81■■□□□ 1.88
SMARCB1-201ENST00000263121 STX6O43752 255 aa26.81■■□□□ 1.88
SMARCB1-201ENST00000263121 METAP2P50579 478 aaKnown RBP eCLIP26.81■■□□□ 1.88
SMARCB1-201ENST00000263121 HMGN5P82970 282 aaKnown RBP26.81■■□□□ 1.88
SMARCB1-201ENST00000263121 MTMR14Q8NCE2 650 aa26.81■■□□□ 1.88
SMARCB1-201ENST00000263121 TDRD3Q9H7E2 651 aaKnown RBP26.81■■□□□ 1.88
SMARCB1-201ENST00000263121 CACNB3P54284 484 aa26.8■■□□□ 1.88
SMARCB1-201ENST00000263121 TFAP4Q01664 338 aa26.8■■□□□ 1.88
SMARCB1-201ENST00000263121 MICU3Q86XE3 530 aa26.8■■□□□ 1.88
SMARCB1-201ENST00000263121 SYT17Q9BSW7 474 aa26.8■■□□□ 1.88
SMARCB1-201ENST00000263121 PDIA4P13667 645 aaKnown RBP26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 PDCP20941 246 aa26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 SYNE3Q6ZMZ3 975 aa26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 ZNF444Q8N0Y2 327 aaPredicted RBP26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 DLGAP5Q15398 846 aa26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 IFIT1BQ5T764 474 aaKnown RBP26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 ZFPM1Q8IX07 1006 aa26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 ZNF654Q8IZM8 581 aa26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 MYL10Q9BUA6 226 aa26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 TCP11L1Q9NUJ3 509 aa26.79■■□□□ 1.88
SMARCB1-201ENST00000263121 SIPA1L1O43166 1804 aa26.78■■□□□ 1.88
SMARCB1-201ENST00000263121 COL2A1P02458 1487 aaPredicted RBP26.78■■□□□ 1.88
SMARCB1-201ENST00000263121 GOLGA8AA7E2F4 631 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms