RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MAP4K1Q92918 833 aa19.83■□□□□ 0.76
CHCHD3-201ENST00000262570 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.76
CHCHD3-201ENST00000262570 FZD1Q9UP38 647 aa19.83■□□□□ 0.76
CHCHD3-201ENST00000262570 BAZ2AQ9UIF9 1905 aaKnown RBP19.82■□□□□ 0.76
CHCHD3-201ENST00000262570 MINDY4BA8MYZ0 360 aa19.82■□□□□ 0.76
CHCHD3-201ENST00000262570 USP2O75604 605 aaPredicted RBP19.82■□□□□ 0.76
CHCHD3-201ENST00000262570 MAP3K11Q16584 847 aa19.82■□□□□ 0.76
CHCHD3-201ENST00000262570 DNAJC18Q9H819 358 aa19.82■□□□□ 0.76
CHCHD3-201ENST00000262570 GBA2Q9HCG7 927 aaPredicted RBP19.82■□□□□ 0.76
CHCHD3-201ENST00000262570 FKBP1BP68106 108 aa19.81■□□□□ 0.76
CHCHD3-201ENST00000262570 PPARAQ07869 468 aa19.81■□□□□ 0.76
CHCHD3-201ENST00000262570 PRKG1Q13976 671 aa19.81■□□□□ 0.76
CHCHD3-201ENST00000262570 CRACR2BQ8N4Y2 399 aaPredicted RBP19.81■□□□□ 0.76
CHCHD3-201ENST00000262570 KLRG1Q96E93 195 aa19.81■□□□□ 0.76
CHCHD3-201ENST00000262570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.81■□□□□ 0.76
CHCHD3-201ENST00000262570 TAOK2Q9UL54 1235 aa19.81■□□□□ 0.76
CHCHD3-201ENST00000262570 FAM196BA6NMK8 535 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 C8orf34Q49A92 452 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 C2orf69Q8N8R5 385 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 DYNLL2Q96FJ2 89 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 ZNF341Q9BYN7 854 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 CTNNA3Q9UI47 895 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 ZNF112Q9UJU3 913 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 ANAPC4Q9UJX5 808 aa19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 U3KPZ7 1027 aaPredicted RBP19.8■□□□□ 0.76
CHCHD3-201ENST00000262570 ROBO3Q96MS0 1386 aa19.79■□□□□ 0.76
CHCHD3-201ENST00000262570 SIPA1L1O43166 1804 aa19.79■□□□□ 0.76
CHCHD3-201ENST00000262570 PHF20L1A8MW92 1017 aa19.79■□□□□ 0.76
CHCHD3-201ENST00000262570 REC8O95072 547 aa19.79■□□□□ 0.76
CHCHD3-201ENST00000262570 MOB2Q70IA6 237 aa19.79■□□□□ 0.76
CHCHD3-201ENST00000262570 ANGEL1Q9UNK9 670 aaKnown RBP19.79■□□□□ 0.76
CHCHD3-201ENST00000262570 TMEM88BA6NKF7 163 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 IREB2P48200 963 aaKnown RBP19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 APLP1P51693 650 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 TTLL12Q14166 644 aaPredicted RBP19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 TATDN1Q6P1N9 297 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 C16orf86Q6ZW13 317 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 ARMC9Q7Z3E5 817 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 TRPM7Q96QT4 1865 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 ZNF213O14771 459 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 SLC44A5Q8NCS7 719 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.78■□□□□ 0.762e-18■□□□□ 9
CHCHD3-201ENST00000262570 SWAP70Q9UH65 585 aa19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 RBM8AQ9Y5S9 174 aaKnown RBP19.78■□□□□ 0.76
CHCHD3-201ENST00000262570 SHMT1P34896 483 aa19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 CDK8P49336 464 aa19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 C1QTNF8P60827 252 aa19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 HAND2P61296 217 aa19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 CTDSPL2Q05D32 466 aa19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 IMMTQ16891 758 aaKnown RBP19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 LDLRAD1Q5T700 205 aa19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 WRNIP1Q96S55 665 aa19.77■□□□□ 0.76
CHCHD3-201ENST00000262570 PAPPA2Q9BXP8 1791 aa19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 UBE2Q2LH0YL09 131 aa19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 EPB41L2O43491 1005 aaKnown RBP19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 SLC3A2P08195 630 aaKnown RBP19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 MAP3K9P80192 1104 aa19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 RRP1BQ14684 758 aaKnown RBP19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 SAPCD2Q86UD0 394 aa19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 NBPF3Q9H094 633 aa19.76■□□□□ 0.75
CHCHD3-201ENST00000262570 UNCXA6NJT0 531 aa19.75■□□□□ 0.75
CHCHD3-201ENST00000262570 CYP21A2P08686 494 aa19.75■□□□□ 0.75
CHCHD3-201ENST00000262570 FGRP09769 529 aa19.75■□□□□ 0.75
CHCHD3-201ENST00000262570 INPP5BP32019 993 aa19.75■□□□□ 0.75
CHCHD3-201ENST00000262570 ANKRD13AQ8IZ07 590 aa19.75■□□□□ 0.75
CHCHD3-201ENST00000262570 STK11IPQ8N1F8 1099 aa19.75■□□□□ 0.75
CHCHD3-201ENST00000262570 TLL2Q9Y6L7 1015 aa19.75■□□□□ 0.75
CHCHD3-201ENST00000262570 CTNND1O60716 968 aaKnown RBP19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 CAP2P40123 477 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 PDE4BQ07343 736 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 ZKSCAN4Q969J2 545 aaPredicted RBP19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 ZNF287Q9HBT7 754 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 CREBZFQ9NS37 354 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 TACC3Q9Y6A5 838 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 SEC24BO95487 1268 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 HUNKP57058 714 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 CERKLQ49MI3 558 aaPredicted RBP19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 AKNAD1Q5T1N1 836 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 TBC1D10CQ8IV04 446 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 STAG1Q8WVM7 1258 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 USP26Q9BXU7 913 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 MKNK2Q9HBH9 465 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 INCENPQ9NQS7 918 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 LAMB1P07942 1786 aa19.74■□□□□ 0.75
CHCHD3-201ENST00000262570 PRDM1O75626 825 aa19.73■□□□□ 0.75
CHCHD3-201ENST00000262570 PCP11498 1178 aaKnown RBP19.73■□□□□ 0.75
CHCHD3-201ENST00000262570 VGLL4Q14135 290 aa19.73■□□□□ 0.75
CHCHD3-201ENST00000262570 NOL9Q5SY16 702 aaKnown RBP19.73■□□□□ 0.75
CHCHD3-201ENST00000262570 SLC27A2O14975 620 aa19.72■□□□□ 0.75
CHCHD3-201ENST00000262570 RASA1P20936 1047 aa19.72■□□□□ 0.75
CHCHD3-201ENST00000262570 JAG1P78504 1218 aa19.72■□□□□ 0.75
CHCHD3-201ENST00000262570 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
CHCHD3-201ENST00000262570 MFSD6Q6ZSS7 791 aa19.72■□□□□ 0.75
CHCHD3-201ENST00000262570 SCYL3Q8IZE3 742 aa19.72■□□□□ 0.75
CHCHD3-201ENST00000262570 CLMNQ96JQ2 1002 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms