RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ENAHQ8N8S7 591 aaPredicted RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 TDRD7Q8NHU6 1098 aaKnown RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 PIBF1Q8WXW3 757 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 ESR2Q92731 530 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 DYNLL2Q96FJ2 89 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 TNMDQ9H2S6 317 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 KIF23Q02241 960 aaPredicted RBP15.77■□□□□ 0.12
VMP1-201ENST00000262291 CPLX2Q6PUV4 134 aaKnown RBP15.77■□□□□ 0.12
VMP1-201ENST00000262291 ZNF396Q96N95 335 aaPredicted RBP15.77■□□□□ 0.12
VMP1-201ENST00000262291 BRIP1Q9BX63 1249 aa15.77■□□□□ 0.12
VMP1-201ENST00000262291 CD209Q9NNX6 404 aa15.77■□□□□ 0.12
VMP1-201ENST00000262291 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.77■□□□□ 0.12
VMP1-201ENST00000262291 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
VMP1-201ENST00000262291 USP5P45974 858 aa15.77■□□□□ 0.11
VMP1-201ENST00000262291 SSRP1Q08945 709 aaKnown RBP15.77■□□□□ 0.11
VMP1-201ENST00000262291 GNL2Q13823 731 aaKnown RBP15.77■□□□□ 0.11
VMP1-201ENST00000262291 RCOR1Q9UKL0 485 aa15.77■□□□□ 0.11
VMP1-201ENST00000262291 MTMR7Q9Y216 660 aa15.77■□□□□ 0.11
VMP1-201ENST00000262291 F8W031 263 aaPredicted RBP15.76■□□□□ 0.11
VMP1-201ENST00000262291 FUCA2Q9BTY2 467 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 USP25Q9UHP3 1055 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 CDKL5O76039 1030 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 MMP10P09238 476 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
VMP1-201ENST00000262291 STK38Q15208 465 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 MAP3K11Q16584 847 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 MYSM1Q5VVJ2 828 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 TBC1D16Q8TBP0 767 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 TGFBRAP1Q8WUH2 860 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 BBXQ8WY36 941 aaPredicted RBP15.76■□□□□ 0.11
VMP1-201ENST00000262291 TSC1Q92574 1164 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 ZSCAN10Q96SZ4 725 aaPredicted RBP15.76■□□□□ 0.11
VMP1-201ENST00000262291 MXD3Q9BW11 206 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 PCDHA7Q9UN72 937 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 TIAM2Q8IVF5 1701 aa15.76■□□□□ 0.11
VMP1-201ENST00000262291 BAZ2BQ9UIF8 2168 aaKnown RBP15.75■□□□□ 0.11
VMP1-201ENST00000262291 SEC23AQ15436 765 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 SF3A1Q15459 793 aaKnown RBP15.75■□□□□ 0.11
VMP1-201ENST00000262291 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 FSIP1Q8NA03 581 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 FANCBQ8NB91 859 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 ANAPC4Q9UJX5 808 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 A0A1B0GVL5 298 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 IFIT1BQ5T764 474 aaKnown RBP15.75■□□□□ 0.11
VMP1-201ENST00000262291 WDR66Q8TBY9 1149 aa15.75■□□□□ 0.11
VMP1-201ENST00000262291 PLEKHA8P1O95397 391 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 TERF1P54274 439 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 SPTY2D1Q68D10 685 aaPredicted RBP15.74■□□□□ 0.11
VMP1-201ENST00000262291 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
VMP1-201ENST00000262291 LETM1O95202 739 aaPredicted RBP15.74■□□□□ 0.11
VMP1-201ENST00000262291 ATP2B1P20020 1258 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 DOK7Q18PE1 504 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 CLSTN2Q9H4D0 955 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 MYH15Q9Y2K3 1946 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 ATP2B4P23634 1241 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 TYRO3Q06418 890 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 MFSD14BQ5SR56 506 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
VMP1-201ENST00000262291 BTBD18B2RXH4 712 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 FMNL1O95466 1100 aaPredicted RBP15.73■□□□□ 0.11
VMP1-201ENST00000262291 GTF2IP78347 998 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 TRIM29Q14134 588 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 PDS5AQ29RF7 1337 aaKnown RBP15.73■□□□□ 0.11
VMP1-201ENST00000262291 BBOX1O75936 387 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 ZSCAN20P17040 1043 aaPredicted RBP15.73■□□□□ 0.11
VMP1-201ENST00000262291 DMTNQ08495 405 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 ZNF772Q68DY9 489 aaPredicted RBP15.73■□□□□ 0.11
VMP1-201ENST00000262291 NBPF11Q86T75 865 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.112e-7■■□□□ 12.7
VMP1-201ENST00000262291 RTEL1Q9NZ71 1219 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 NOL7Q9UMY1 257 aaKnown RBP15.73■□□□□ 0.11
VMP1-201ENST00000262291 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
VMP1-201ENST00000262291 TSPY2A6NKD2 308 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 CCDC192P0DO97 292 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 IFNAR1P17181 557 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 BTDP43251 543 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 CRACR2BQ8N4Y2 399 aaPredicted RBP15.72■□□□□ 0.11
VMP1-201ENST00000262291 ATP8A2Q9NTI2 1148 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 DUOX1Q9NRD9 1551 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 RXRBP28702 533 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 PLCD1P51178 756 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 NR5A1Q13285 461 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 ANO6Q4KMQ2 910 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 ANO1Q5XXA6 986 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 CCDC73Q6ZRK6 1079 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 LUZP1Q86V48 1076 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 IQCA1Q86XH1 822 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 OXER1Q8TDS5 423 aa15.72■□□□□ 0.11
VMP1-201ENST00000262291 DDX19AQ9NUU7 478 aaKnown RBP15.72■□□□□ 0.11
VMP1-201ENST00000262291 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.72■□□□□ 0.115e-7■■■■■ 27.4
VMP1-201ENST00000262291 ECM29Q5VYK3 1845 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 DYNC1I1O14576 645 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 SPTLC2O15270 562 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 AP5Z1O43299 807 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 HOXA10P31260 410 aaPredicted RBP15.71■□□□□ 0.11
VMP1-201ENST00000262291 CBX1P83916 185 aa15.71■□□□□ 0.11
VMP1-201ENST00000262291 SNW1Q13573 536 aaKnown RBP15.71■□□□□ 0.11
VMP1-201ENST00000262291 TRIM22Q8IYM9 498 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms