RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 CASQ2O14958 399 aaPredicted RBP11.91□□□□□ -0.5
KPNA3-201ENST00000261667 PLA2G4AP47712 749 aa11.91□□□□□ -0.5
KPNA3-201ENST00000261667 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
KPNA3-201ENST00000261667 CPS1P31327 1500 aa11.91□□□□□ -0.5
KPNA3-201ENST00000261667 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
KPNA3-201ENST00000261667 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
KPNA3-201ENST00000261667 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
KPNA3-201ENST00000261667 MACROD2A1Z1Q3 448 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 ZNF189O75820 626 aaPredicted RBP11.9□□□□□ -0.5
KPNA3-201ENST00000261667 ZNF131P52739 623 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
KPNA3-201ENST00000261667 ARID5BQ14865 1188 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 CEP70Q8NHQ1 597 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 TDRD7Q8NHU6 1098 aaKnown RBP11.9□□□□□ -0.5
KPNA3-201ENST00000261667 TCEANC2Q96MN5 208 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 OSBPL1AQ9BXW6 950 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 FLIIQ13045 1269 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 PAK2Q13177 524 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.9□□□□□ -0.5
KPNA3-201ENST00000261667 FCHSD2O94868 740 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 SKIP12755 728 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
KPNA3-201ENST00000261667 KIAA0753Q2KHM9 967 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 LONRF3Q496Y0 759 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 DHX58Q96C10 678 aa11.9□□□□□ -0.5
KPNA3-201ENST00000261667 NLRP1Q9C000 1473 aa11.9□□□□□ -0.51
KPNA3-201ENST00000261667 CIB2O75838 187 aa11.9□□□□□ -0.51
KPNA3-201ENST00000261667 HSP90AA5PQ58FG0 334 aa11.9□□□□□ -0.51
KPNA3-201ENST00000261667 TMEM132EQ6IEE7 984 aa11.9□□□□□ -0.51
KPNA3-201ENST00000261667 BRF1Q92994 677 aa11.9□□□□□ -0.51
KPNA3-201ENST00000261667 ZMYND10O75800 440 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 TMCO4Q5TGY1 634 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 VPS52Q8N1B4 723 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 IGSF22Q8N9C0 903 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 LRRC45Q96CN5 670 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 UIMC1Q96RL1 719 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 CABP2Q9NPB3 220 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 TSC22D4Q9Y3Q8 395 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 USP27XA6NNY8 438 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 MEFVO15553 781 aaPredicted RBP11.89□□□□□ -0.51
KPNA3-201ENST00000261667 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
KPNA3-201ENST00000261667 RPGRIP1Q96KN7 1286 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 SEPT11Q9NVA2 429 aaKnown RBP11.89□□□□□ -0.51
KPNA3-201ENST00000261667 TECPR2O15040 1411 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 RIMS2Q9UQ26 1411 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 DTNBO60941 627 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 TNNC1P63316 161 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 FAM133BQ5BKY9 247 aaKnown RBP11.89□□□□□ -0.51
KPNA3-201ENST00000261667 VPS53Q5VIR6 699 aa11.89□□□□□ -0.51
KPNA3-201ENST00000261667 PCYT1AP49585 367 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 SLC44A4Q53GD3 710 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 MAP7D3Q8IWC1 876 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 KCNG4Q8TDN1 519 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 SIRT1Q96EB6 747 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 GUCY2FP51841 1108 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 DEUP1Q05D60 604 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 ADCY2Q08462 1091 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 PAPOLBQ9NRJ5 636 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 SAR1BQ9Y6B6 198 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 YTHDC2Q9H6S0 1430 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 A0A1B0GVL5 298 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 CDC25BP30305 580 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 CCT4P50991 539 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 RBM5P52756 815 aaKnown RBP eCLIP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 NBPF10Q6P3W6 841 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 BICD1Q96G01 975 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 KCNF1Q9H3M0 494 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 SHPRHQ149N8 1683 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 RNF8O76064 485 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 WDR75Q8IWA0 830 aaKnown RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
KPNA3-201ENST00000261667 SH3BP1Q9Y3L3 701 aa11.88□□□□□ -0.51
KPNA3-201ENST00000261667 CD163L1Q9NR16 1453 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 STAMBPO95630 424 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 MTIF2P46199 727 aaKnown RBP11.87□□□□□ -0.51
KPNA3-201ENST00000261667 RASSF2P50749 326 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 CCDC110Q8TBZ0 833 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 SNRNP27Q8WVK2 155 aaKnown RBP11.87□□□□□ -0.51
KPNA3-201ENST00000261667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.87□□□□□ -0.51
KPNA3-201ENST00000261667 ADGRB2O60241 1585 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 AIMP1Q12904 312 aaKnown RBP11.87□□□□□ -0.51
KPNA3-201ENST00000261667 TRIM74Q86UV6 250 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 TRIM73Q86UV7 250 aa11.87□□□□□ -0.51
KPNA3-201ENST00000261667 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms