RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 H7C1W4 665 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 RBL2Q08999 1139 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 CCDC57Q2TAC2 916 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 CPLX2Q6PUV4 134 aaKnown RBP18.16■□□□□ 0.5
LMNB1-201ENST00000261366 IFNL2Q8IZJ0 200 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 STAMQ92783 540 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 ABCB6Q9NP58 842 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 ZMYM6O95789 1325 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 CYP27B1O15528 508 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 ZBTB43O43298 467 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 NR5A1Q13285 461 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 ACRBPQ8NEB7 543 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 ANKZF1Q9H8Y5 726 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 RGPD5Q99666 1765 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 AKR1B15C9JRZ8 316 aaPredicted RBP18.15■□□□□ 0.5
LMNB1-201ENST00000261366 CUTAO60888 179 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 APPBP2Q92624 585 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 SPATA31A3Q5VYP0 1347 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 GOLGA6L9A6NEM1 432 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 ATP8B1O43520 1251 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 PPFIBP1Q86W92 1011 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 IGSF22Q8N9C0 903 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 GDAP1L1Q96MZ0 367 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 UBN2Q6ZU65 1347 aa18.15■□□□□ 0.5
LMNB1-201ENST00000261366 KIF5CO60282 957 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 CCT6AP40227 531 aaKnown RBP18.14■□□□□ 0.49
LMNB1-201ENST00000261366 TMEM67Q5HYA8 995 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 SRGAP1Q7Z6B7 1085 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 RGS22Q8NE09 1264 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 MEGF6O75095 1541 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 LEKR1Q6ZMV7 388 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 SYNE4Q8N205 404 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 FAM89AQ96GI7 184 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 PCDHB6Q9Y5E3 794 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 C5P01031 1676 aa18.14■□□□□ 0.49
LMNB1-201ENST00000261366 CCDC151A5D8V7 595 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 CTDSPL2Q05D32 466 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 BRINP3Q76B58 766 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 DIS3L2Q8IYB7 885 aaKnown RBP18.13■□□□□ 0.49
LMNB1-201ENST00000261366 SLC35F6Q8N357 371 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 HINFPQ9BQA5 517 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 RRP15Q9Y3B9 282 aaKnown RBP18.13■□□□□ 0.49
LMNB1-201ENST00000261366 SH2B2O14492 632 aaPredicted RBP18.13■□□□□ 0.49
LMNB1-201ENST00000261366 CDKL5O76039 1030 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 CDC25AP30304 524 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 MUM1L1Q5H9M0 696 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 CWC15Q9P013 229 aaKnown RBP18.13■□□□□ 0.49
LMNB1-201ENST00000261366 ADGRG1Q9Y653 693 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 KIF1AQ12756 1690 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 hCG_1642624A0A1W2PR95 340 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 ZNF18P17022 549 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 CASP14P31944 242 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 TOB1P50616 345 aaPredicted RBP18.13■□□□□ 0.49
LMNB1-201ENST00000261366 VSNL1P62760 191 aa18.13■□□□□ 0.49
LMNB1-201ENST00000261366 MDM2Q00987 491 aaPredicted RBP18.13■□□□□ 0.49
LMNB1-201ENST00000261366 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
LMNB1-201ENST00000261366 BEND6Q5SZJ8 279 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-201ENST00000261366 GOLGA5Q8TBA6 731 aa18.12■□□□□ 0.49
LMNB1-201ENST00000261366 EXOC4Q96A65 974 aa18.12■□□□□ 0.49
LMNB1-201ENST00000261366 HOOK1Q9UJC3 728 aaKnown RBP18.12■□□□□ 0.49
LMNB1-201ENST00000261366 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
LMNB1-201ENST00000261366 TNS3Q68CZ2 1445 aa18.12■□□□□ 0.49
LMNB1-201ENST00000261366 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
LMNB1-201ENST00000261366 ACTN2P35609 894 aa18.12■□□□□ 0.49
LMNB1-201ENST00000261366 NOSTRINQ8IVI9 506 aa18.12■□□□□ 0.49
LMNB1-201ENST00000261366 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
LMNB1-201ENST00000261366 SSRP1Q08945 709 aaKnown RBP18.11■□□□□ 0.49
LMNB1-201ENST00000261366 NCAPH2Q6IBW4 605 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 IPO4Q8TEX9 1081 aaKnown RBP18.11■□□□□ 0.49
LMNB1-201ENST00000261366 NUP133Q8WUM0 1156 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 SLC12A7Q9Y666 1083 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 FAM205CA6NFA0 338 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 MCAMP43121 646 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 SRLQ86TD4 932 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 FBXL16Q8N461 479 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 OXER1Q8TDS5 423 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 TSPYL1Q9H0U9 437 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 GPR108Q9NPR9 543 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 CDC23Q9UJX2 597 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 OVOS2A0A0G2JMS6 1433 aa18.11■□□□□ 0.49
LMNB1-201ENST00000261366 ALS2Q96Q42 1657 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 NR1I3Q14994 352 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 BRD3Q15059 726 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 HDXQ7Z353 690 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 ZFYP08048 801 aaPredicted RBP18.1■□□□□ 0.49
LMNB1-201ENST00000261366 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
LMNB1-201ENST00000261366 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
LMNB1-201ENST00000261366 TOM1L2Q6ZVM7 507 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 MLKLQ8NB16 471 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 NOA1Q8NC60 698 aaKnown RBP18.1■□□□□ 0.49
LMNB1-201ENST00000261366 ENOX1Q8TC92 643 aaKnown RBP18.1■□□□□ 0.49
LMNB1-201ENST00000261366 EPSTI1Q96J88 318 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 CSRNP2Q9H175 543 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 CABP5Q9NP86 173 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 FAM217BQ9NTX9 383 aaPredicted RBP18.1■□□□□ 0.49
LMNB1-201ENST00000261366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■■■□□ 16.7
LMNB1-201ENST00000261366 CPDO75976 1380 aa18.1■□□□□ 0.49
LMNB1-201ENST00000261366 MAP2K7O14733 419 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms