RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SH2B2O14492 632 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-201ENST00000258607 POLR2DO15514 142 aaKnown RBP10.5□□□□□ -0.73
CKAP2-201ENST00000258607 SLC3A2P08195 630 aaKnown RBP10.5□□□□□ -0.73
CKAP2-201ENST00000258607 SYKP43405 635 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 NBPF11Q86T75 865 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 ZNF444Q8N0Y2 327 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-201ENST00000258607 CNNM3Q8NE01 707 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 ZNF384Q8TF68 577 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 KCPQ6ZWJ8 1503 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 ZNF142P52746 1687 aaPredicted RBP10.5□□□□□ -0.73
CKAP2-201ENST00000258607 PHRF1Q9P1Y6 1649 aaKnown RBP10.5□□□□□ -0.73
CKAP2-201ENST00000258607 MMP10P09238 476 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 GPSM2P81274 684 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 MRPS27Q92552 414 aaKnown RBP10.5□□□□□ -0.73
CKAP2-201ENST00000258607 NARFQ9UHQ1 456 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 SCN11AQ9UI33 1791 aa10.5□□□□□ -0.73
CKAP2-201ENST00000258607 RPS6KA4O75676 772 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 ATP1A3P13637 1013 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 PFKFB1P16118 471 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 SLC16A2P36021 539 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 UBE3CQ15386 1083 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 EARS2Q5JPH6 523 aaKnown RBP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 ANO1Q5XXA6 986 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 PRR5LQ6MZQ0 368 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 USP17L2Q6R6M4 530 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 TEX11Q8IYF3 940 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 CTCFLQ8NI51 663 aaPredicted RBP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 ZNF202O95125 648 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 SERPINC1P01008 464 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 SSBP05455 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 ENAHQ8N8S7 591 aaPredicted RBP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 FANCBQ8NB91 859 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 EPSTI1Q96J88 318 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 CRNKL1Q9BZJ0 848 aaKnown RBP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 RBAK-RBAKDNI3L0D1 243 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 WNT7AO00755 349 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 MARCH6O60337 910 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 FGFR2P21802 821 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 KIF23Q02241 960 aaPredicted RBP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 KRT27Q7Z3Y8 459 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 DEFB132Q7Z7B7 95 aa10.49□□□□□ -0.73
CKAP2-201ENST00000258607 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 TMX4Q9H1E5 349 aaPredicted RBP10.49□□□□□ -0.73
CKAP2-201ENST00000258607 JCADQ9P266 1359 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 KIF1AQ12756 1690 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 CDHR2Q9BYE9 1310 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
CKAP2-201ENST00000258607 CFAP100Q494V2 611 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 SPICE1Q8N0Z3 855 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 IGDCC4Q8TDY8 1250 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 ZC3H12CQ9C0D7 883 aaKnown RBP10.48□□□□□ -0.73
CKAP2-201ENST00000258607 CCDC39Q9UFE4 941 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 MRC1P22897 1456 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 ROBO1Q9Y6N7 1651 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 TCRBV5S4A2TA0A5A2 114 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 PP2D1A8MPX8 630 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 BTDP43251 543 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 CTR9Q6PD62 1173 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 TMC6Q7Z403 805 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 KAT14Q9H8E8 782 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 BSDC1Q9NW68 430 aaPredicted RBP10.48□□□□□ -0.73
CKAP2-201ENST00000258607 UQCRHLA0A096LP55 91 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 UQCRHP07919 91 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 CCAR2Q8N163 923 aaKnown RBP10.48□□□□□ -0.73
CKAP2-201ENST00000258607 ZHX3Q9H4I2 956 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 ZSCAN16Q9H4T2 348 aaPredicted RBP10.48□□□□□ -0.73
CKAP2-201ENST00000258607 IFNKQ9P0W0 207 aa10.48□□□□□ -0.73
CKAP2-201ENST00000258607 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.48□□□□□ -0.73
CKAP2-201ENST00000258607 STRCQ7RTU9 1775 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 MROH7-TTC4A0A0A0MT08 1334 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
CKAP2-201ENST00000258607 ST5P78524 1137 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 TXNRD1Q16881 649 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 CCDC96Q2M329 555 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 JAKMIP3Q5VZ66 844 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 ZNF274Q96GC6 653 aaPredicted RBP10.47□□□□□ -0.73
CKAP2-201ENST00000258607 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
CKAP2-201ENST00000258607 DCP1AQ9NPI6 582 aaPredicted RBP10.47□□□□□ -0.73
CKAP2-201ENST00000258607 TTF2Q9UNY4 1162 aaKnown RBP10.47□□□□□ -0.73
CKAP2-201ENST00000258607 CLRN2A0PK11 232 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 LONRF3Q496Y0 759 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 NSUN4Q96CB9 384 aaKnown RBP10.47□□□□□ -0.73
CKAP2-201ENST00000258607 CLSTN2Q9H4D0 955 aa10.47□□□□□ -0.73
CKAP2-201ENST00000258607 NAA30Q147X3 362 aaPredicted RBP10.46□□□□□ -0.73
CKAP2-201ENST00000258607 TPD52L1Q16890 204 aaPredicted RBP10.46□□□□□ -0.73
CKAP2-201ENST00000258607 LINC00301Q8NCQ3 95 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 ZSCAN10Q96SZ4 725 aaPredicted RBP10.46□□□□□ -0.73
CKAP2-201ENST00000258607 PLA2G12BQ9BX93 195 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 KRT23Q9C075 422 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 GGA1Q9UJY5 639 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 ZKSCAN5Q9Y2L8 839 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.73
CKAP2-201ENST00000258607 VPS72Q15906 364 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 CCDC144BQ3MJ40 725 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 SLC30A10Q6XR72 485 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 AMOTL1Q8IY63 956 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 FNBP4Q8N3X1 1017 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms