RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 NAV1Q8NEY1 1877 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 SPDYE5A6NIY4 337 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 FAM196BA6NMK8 535 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 RNF113AO15541 343 aaKnown RBP22.51■■□□□ 1.19
UPK3B-201ENST00000257632 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
UPK3B-201ENST00000257632 SLURP2P0DP57 97 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 MAP3K10Q02779 954 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 SLC4A8Q2Y0W8 1093 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 CNKSR2Q8WXI2 1034 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 ABHD8Q96I13 439 aa22.51■■□□□ 1.19
UPK3B-201ENST00000257632 HERC5Q9UII4 1024 aaKnown RBP22.51■■□□□ 1.19
UPK3B-201ENST00000257632 GJA5P36382 358 aa22.5■■□□□ 1.19
UPK3B-201ENST00000257632 NOL9Q5SY16 702 aaKnown RBP22.5■■□□□ 1.19
UPK3B-201ENST00000257632 SDR42E1Q8WUS8 393 aa22.5■■□□□ 1.19
UPK3B-201ENST00000257632 APPBP2Q92624 585 aa22.5■■□□□ 1.19
UPK3B-201ENST00000257632 PICK1Q9NRD5 415 aa22.5■■□□□ 1.19
UPK3B-201ENST00000257632 PHF20L1A8MW92 1017 aa22.49■■□□□ 1.19
UPK3B-201ENST00000257632 POLR3DP05423 398 aaPredicted RBP22.49■■□□□ 1.19
UPK3B-201ENST00000257632 NEFLP07196 543 aa22.49■■□□□ 1.19
UPK3B-201ENST00000257632 INHBEP58166 350 aa22.49■■□□□ 1.19
UPK3B-201ENST00000257632 TTC6Q86TZ1 520 aa22.49■■□□□ 1.19
UPK3B-201ENST00000257632 FOXP4Q8IVH2 680 aaPredicted RBP22.49■■□□□ 1.19
UPK3B-201ENST00000257632 SCYL3Q8IZE3 742 aa22.49■■□□□ 1.19
UPK3B-201ENST00000257632 EVI5LQ96CN4 794 aa22.49■■□□□ 1.19
UPK3B-201ENST00000257632 PUS7LQ9H0K6 701 aaKnown RBP22.49■■□□□ 1.19
UPK3B-201ENST00000257632 SIPA1L1O43166 1804 aa22.48■■□□□ 1.19
UPK3B-201ENST00000257632 DOCK1Q14185 1865 aa22.48■■□□□ 1.19
UPK3B-201ENST00000257632 CTNND1O60716 968 aaKnown RBP22.48■■□□□ 1.19
UPK3B-201ENST00000257632 TM4SF4P48230 202 aa22.48■■□□□ 1.19
UPK3B-201ENST00000257632 PLEKHM2Q8IWE5 1019 aa22.48■■□□□ 1.19
UPK3B-201ENST00000257632 DDRGK1Q96HY6 314 aa22.48■■□□□ 1.19
UPK3B-201ENST00000257632 MCM9Q9NXL9 1143 aa22.48■■□□□ 1.19
UPK3B-201ENST00000257632 TRIM6-TRIM34B2RNG4 842 aa22.47■■□□□ 1.19
UPK3B-201ENST00000257632 TRPA1O75762 1119 aa22.47■■□□□ 1.19
UPK3B-201ENST00000257632 GTF2A2P52657 109 aa22.47■■□□□ 1.19
UPK3B-201ENST00000257632 PPATQ06203 517 aa22.47■■□□□ 1.19
UPK3B-201ENST00000257632 PPIL2Q13356 520 aa22.47■■□□□ 1.19
UPK3B-201ENST00000257632 RNF186Q9NXI6 227 aa22.47■■□□□ 1.19
UPK3B-201ENST00000257632 SLC4A4Q9Y6R1 1079 aa22.47■■□□□ 1.19
UPK3B-201ENST00000257632 LAMB1P07942 1786 aa22.46■■□□□ 1.19
UPK3B-201ENST00000257632 PRKAB2O43741 272 aa22.46■■□□□ 1.19
UPK3B-201ENST00000257632 OSBP2Q969R2 916 aa22.46■■□□□ 1.19
UPK3B-201ENST00000257632 DCP1AQ9NPI6 582 aaPredicted RBP22.46■■□□□ 1.19
UPK3B-201ENST00000257632 ATP8A2Q9NTI2 1148 aa22.46■■□□□ 1.19
UPK3B-201ENST00000257632 SAGE1Q9NXZ1 904 aa22.46■■□□□ 1.19
UPK3B-201ENST00000257632 IRF6O14896 467 aa22.45■■□□□ 1.18
UPK3B-201ENST00000257632 SNAPC2Q13487 334 aa22.45■■□□□ 1.18
UPK3B-201ENST00000257632 AMOTL1Q8IY63 956 aa22.45■■□□□ 1.18
UPK3B-201ENST00000257632 RILPL2Q969X0 211 aa22.45■■□□□ 1.18
UPK3B-201ENST00000257632 OSBPL3Q9H4L5 887 aa22.45■■□□□ 1.18
UPK3B-201ENST00000257632 SERPINB13Q9UIV8 391 aa22.45■■□□□ 1.18
UPK3B-201ENST00000257632 DDX60LQ5H9U9 1706 aaKnown RBP22.45■■□□□ 1.18
UPK3B-201ENST00000257632 CCL15-CCL14A0A0B4J2E2 113 aa22.44■■□□□ 1.18
UPK3B-201ENST00000257632 CCL15Q16663 113 aa22.44■■□□□ 1.18
UPK3B-201ENST00000257632 OTUD7BQ6GQQ9 843 aa22.44■■□□□ 1.18
UPK3B-201ENST00000257632 IFNL1Q8IU54 200 aa22.44■■□□□ 1.18
UPK3B-201ENST00000257632 ATAD5Q96QE3 1844 aa22.44■■□□□ 1.18
UPK3B-201ENST00000257632 EHD4Q9H223 541 aa22.44■■□□□ 1.18
UPK3B-201ENST00000257632 BAZ2AQ9UIF9 1905 aaKnown RBP22.44■■□□□ 1.18
UPK3B-201ENST00000257632 GPAA1O43292 621 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 ALDH1A1P00352 501 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 PTPRAP18433 802 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 CAP2P40123 477 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 METTL16Q86W50 562 aaKnown RBP22.43■■□□□ 1.18
UPK3B-201ENST00000257632 MS4A4AQ96JQ5 239 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 STRBPQ96SI9 672 aaKnown RBP22.43■■□□□ 1.18
UPK3B-201ENST00000257632 DNAJC18Q9H819 358 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 ZHX2Q9Y6X8 837 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 CASP8AP2Q9UKL3 1982 aa22.43■■□□□ 1.18
UPK3B-201ENST00000257632 CCDC85CA6NKD9 419 aa22.42■■□□□ 1.18
UPK3B-201ENST00000257632 M0R2C6 588 aa22.42■■□□□ 1.18
UPK3B-201ENST00000257632 CETPP11597 493 aa22.42■■□□□ 1.18
UPK3B-201ENST00000257632 GNAT2P19087 354 aa22.42■■□□□ 1.18
UPK3B-201ENST00000257632 PLCD1P51178 756 aa22.42■■□□□ 1.18
UPK3B-201ENST00000257632 ZMYM1Q5SVZ6 1142 aa22.42■■□□□ 1.18
UPK3B-201ENST00000257632 TESPA1A2RU30 521 aaPredicted RBP22.41■■□□□ 1.18
UPK3B-201ENST00000257632 IGF2BP3O00425 579 aaKnown RBP eCLIP22.41■■□□□ 1.18
UPK3B-201ENST00000257632 PDE4AP27815 886 aa22.41■■□□□ 1.18
UPK3B-201ENST00000257632 BRI3BPQ8WY22 251 aa22.41■■□□□ 1.18
UPK3B-201ENST00000257632 SEC62Q99442 399 aaKnown RBP22.41■■□□□ 1.18
UPK3B-201ENST00000257632 GDF11O95390 407 aa22.4■■□□□ 1.18
UPK3B-201ENST00000257632 TBC1D8O95759 1140 aa22.4■■□□□ 1.18
UPK3B-201ENST00000257632 APPP05067 770 aa22.4■■□□□ 1.18
UPK3B-201ENST00000257632 CYP2D6P10635 497 aa22.4■■□□□ 1.18
UPK3B-201ENST00000257632 RRP1BQ14684 758 aaKnown RBP22.4■■□□□ 1.18
UPK3B-201ENST00000257632 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.4■■□□□ 1.18
UPK3B-201ENST00000257632 KCNH4Q9UQ05 1017 aa22.4■■□□□ 1.18
UPK3B-201ENST00000257632 USP17L12C9JPN9 530 aa22.39■■□□□ 1.17
UPK3B-201ENST00000257632 USP17L21D6R901 530 aa22.39■■□□□ 1.17
UPK3B-201ENST00000257632 CXCL11O14625 94 aa22.39■■□□□ 1.17
UPK3B-201ENST00000257632 ASNSP08243 561 aa22.39■■□□□ 1.17
UPK3B-201ENST00000257632 CCDC84Q86UT8 332 aaPredicted RBP22.39■■□□□ 1.17
UPK3B-201ENST00000257632 PTPN18Q99952 460 aa22.39■■□□□ 1.17
UPK3B-201ENST00000257632 USP17L5A8MUK1 530 aa22.38■■□□□ 1.17
UPK3B-201ENST00000257632 TDO2P48775 406 aa22.38■■□□□ 1.17
UPK3B-201ENST00000257632 CENPQQ7L2Z9 268 aaPredicted RBP22.38■■□□□ 1.17
UPK3B-201ENST00000257632 TICAM2Q86XR7 235 aa22.38■■□□□ 1.17
UPK3B-201ENST00000257632 TBC1D2Q9BYX2 928 aa22.38■■□□□ 1.17
UPK3B-201ENST00000257632 AS3MTQ9HBK9 375 aa22.38■■□□□ 1.17
UPK3B-201ENST00000257632 GINM1Q9NU53 330 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms