RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 PRDM1O75626 825 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 MMP1P03956 469 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 PNOCQ13519 176 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 NOSTRINQ8IVI9 506 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 LRRC8AQ8IWT6 810 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 DIS3L2Q8IYB7 885 aaKnown RBP19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 RGS22Q8NE09 1264 aa19.11■□□□□ 0.65
UBQLN1-201ENST00000257468 SCN7AQ01118 1682 aa19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 TNKSO95271 1327 aa19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 TOB1P50616 345 aaPredicted RBP19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 NLRP12P59046 1061 aa19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 NR5A1Q13285 461 aa19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 UBE4AQ14139 1066 aa19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 UBAC1Q9BSL1 405 aa19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 GNL3LQ9NVN8 582 aaKnown RBP19.1■□□□□ 0.65
UBQLN1-201ENST00000257468 GRIN1Q05586 938 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 CAVIN4Q5BKX8 364 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 RESP18Q5W5W9 173 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 CRACR2BQ8N4Y2 399 aaPredicted RBP19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 FANCBQ8NB91 859 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 RNF41Q9H4P4 317 aaPredicted RBP19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 TRIM22Q8IYM9 498 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 JMYQ8N9B5 988 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 OXER1Q8TDS5 423 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 MYH2Q9UKX2 1941 aa19.09■□□□□ 0.65
UBQLN1-201ENST00000257468 hCG_1642624A0A1W2PR95 340 aa19.08■□□□□ 0.65
UBQLN1-201ENST00000257468 SEC23AQ15436 765 aa19.08■□□□□ 0.65
UBQLN1-201ENST00000257468 SHISA4Q96DD7 197 aa19.08■□□□□ 0.65
UBQLN1-201ENST00000257468 TFCP2L1Q9NZI6 479 aa19.08■□□□□ 0.65
UBQLN1-201ENST00000257468 RIOK3O14730 519 aaKnown RBP19.08■□□□□ 0.64
UBQLN1-201ENST00000257468 NCAPHQ15003 741 aa19.08■□□□□ 0.64
UBQLN1-201ENST00000257468 LONRF3Q496Y0 759 aa19.08■□□□□ 0.64
UBQLN1-201ENST00000257468 SLC51AQ86UW1 340 aa19.08■□□□□ 0.64
UBQLN1-201ENST00000257468 WASF1Q92558 559 aa19.08■□□□□ 0.64
UBQLN1-201ENST00000257468 JAG2Q9Y219 1238 aa19.08■□□□□ 0.64
UBQLN1-201ENST00000257468 USP27XA6NNY8 438 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 FOXN1O15353 648 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 ATP2B1P20020 1258 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 RBM6P78332 1123 aaKnown RBP19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 FAM182BQ5T319 152 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 METTL16Q86W50 562 aaKnown RBP19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 ENAHQ8N8S7 591 aaPredicted RBP19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 C8orf37Q96NL8 207 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 BPIFA3Q9BQP9 254 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 XPO4Q9C0E2 1151 aaKnown RBP19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 IFNKQ9P0W0 207 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 DUOX1Q9NRD9 1551 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 SMC2O95347 1197 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 DEXIO95424 95 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 AMIGO3Q86WK7 504 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 ESR2Q92731 530 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 TIGD1Q96MW7 591 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 ARID3AQ99856 593 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 ANAPC4Q9UJX5 808 aa19.07■□□□□ 0.64
UBQLN1-201ENST00000257468 CUTAO60888 179 aa19.06■□□□□ 0.64
UBQLN1-201ENST00000257468 SAFBQ15424 915 aaKnown RBP eCLIP19.06■□□□□ 0.64
UBQLN1-201ENST00000257468 PDCL3Q9H2J4 239 aa19.06■□□□□ 0.64
UBQLN1-201ENST00000257468 PCDHB6Q9Y5E3 794 aa19.06■□□□□ 0.64
UBQLN1-201ENST00000257468 FAM205CA6NFA0 338 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 UBAP1LF5GYI3 381 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 LMOD1P29536 600 aaPredicted RBP19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 GTF2F1P35269 517 aaKnown RBP eCLIP19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 CCZ1BP86790 482 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 CCZ1P86791 482 aaPredicted RBP19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 KRI1Q8N9T8 703 aaKnown RBP19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 TUBE1Q9UJT0 475 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 KCNH3Q9ULD8 1083 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 FAM237AA0A1B0GTK4 181 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 SKILP12757 684 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 CHAF1AQ13111 956 aaPredicted RBP19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 FOXP4Q8IVH2 680 aaPredicted RBP19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 ZNF710Q8N1W2 664 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 TMTC2Q8N394 836 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 ZSCAN10Q96SZ4 725 aaPredicted RBP19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 CNTNAP4Q9C0A0 1308 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 MYH6P13533 1939 aa19.05■□□□□ 0.64
UBQLN1-201ENST00000257468 PLEKHA8P1O95397 391 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 ATP1A3P13637 1013 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 MECOMQ03112 1051 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 TPD52L1Q16890 204 aaPredicted RBP19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 CTR9Q6PD62 1173 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 NBPF5PQ86XG9 351 aaPredicted RBP19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 HSD3B7Q9H2F3 369 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 VPS54Q9P1Q0 977 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 CCDC196A0A1B0GTZ2 297 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 GNPATO15228 680 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 RPS8P62241 208 aaKnown RBP19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 KRBA2Q6ZNG9 492 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 FBXO33Q7Z6M2 555 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 CNNM3Q8NE01 707 aa19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 NSUN4Q96CB9 384 aaKnown RBP19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 FOXP1Q9H334 677 aaPredicted RBP19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 AATFQ9NY61 560 aaKnown RBP eCLIP19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 FBXO2Q9UK22 296 aaPredicted RBP19.04■□□□□ 0.64
UBQLN1-201ENST00000257468 USP17L12C9JPN9 530 aa19.03■□□□□ 0.64
UBQLN1-201ENST00000257468 USP17L21D6R901 530 aa19.03■□□□□ 0.64
UBQLN1-201ENST00000257468 TNNT1P13805 278 aa19.03■□□□□ 0.64
UBQLN1-201ENST00000257468 PRDX5P30044 214 aa19.03■□□□□ 0.64
UBQLN1-201ENST00000257468 SLC4A8Q2Y0W8 1093 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms