RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 PPATQ06203 517 aa21.7■■□□□ 1.06
SNRPA1-201ENST00000254193 PPIL2Q13356 520 aa21.7■■□□□ 1.06
SNRPA1-201ENST00000254193 ZSCAN25Q6NSZ9 544 aa21.7■■□□□ 1.06
SNRPA1-201ENST00000254193 SCYL3Q8IZE3 742 aa21.7■■□□□ 1.06
SNRPA1-201ENST00000254193 BRI3BPQ8WY22 251 aa21.7■■□□□ 1.06
SNRPA1-201ENST00000254193 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
SNRPA1-201ENST00000254193 PICK1Q9NRD5 415 aa21.7■■□□□ 1.06
SNRPA1-201ENST00000254193 CCL15-CCL14A0A0B4J2E2 113 aa21.69■■□□□ 1.06
SNRPA1-201ENST00000254193 RRP1BQ14684 758 aaKnown RBP21.69■■□□□ 1.06
SNRPA1-201ENST00000254193 CCL15Q16663 113 aa21.69■■□□□ 1.06
SNRPA1-201ENST00000254193 FOXP4Q8IVH2 680 aaPredicted RBP21.69■■□□□ 1.06
SNRPA1-201ENST00000254193 HERC5Q9UII4 1024 aaKnown RBP21.69■■□□□ 1.06
SNRPA1-201ENST00000254193 PRKAB2O43741 272 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 PTPRAP18433 802 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 PDE1AP54750 535 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 NUCB1Q02818 461 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 SNAPC2Q13487 334 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 CHD1LQ86WJ1 897 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 CRACR2BQ8N4Y2 399 aaPredicted RBP21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 SDR42E1Q8WUS8 393 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 R3HDMLQ9H3Y0 253 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 DNAJC18Q9H819 358 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 STAP2Q9UGK3 403 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 ZHX2Q9Y6X8 837 aa21.68■■□□□ 1.06
SNRPA1-201ENST00000254193 MYO5AQ9Y4I1 1855 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 RNF113AO15541 343 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 ALDH1A1P00352 501 aa21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 HLA-DOAP06340 250 aa21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 CCDC84Q86UT8 332 aaPredicted RBP21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 METTL16Q86W50 562 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 TRIM34Q9BYJ4 488 aa21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 PUS7LQ9H0K6 701 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 OTOFQ9HC10 1997 aa21.67■■□□□ 1.06
SNRPA1-201ENST00000254193 CETPP11597 493 aa21.66■■□□□ 1.06
SNRPA1-201ENST00000254193 DCP1AQ9NPI6 582 aaPredicted RBP21.66■■□□□ 1.06
SNRPA1-201ENST00000254193 DOCK2Q92608 1830 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 POLR3DP05423 398 aaPredicted RBP21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 CAP2P40123 477 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 OTUD7BQ6GQQ9 843 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 TNS4Q8IZW8 715 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 FAM43AQ8N2R8 423 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 FSD1Q9BTV5 496 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 MCM9Q9NXL9 1143 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 KCNH4Q9UQ05 1017 aa21.65■■□□□ 1.06
SNRPA1-201ENST00000254193 PLCD1P51178 756 aa21.64■■□□□ 1.05
SNRPA1-201ENST00000254193 EVX2Q03828 476 aa21.64■■□□□ 1.05
SNRPA1-201ENST00000254193 TTC6Q86TZ1 520 aa21.64■■□□□ 1.05
SNRPA1-201ENST00000254193 OSBP2Q969R2 916 aa21.64■■□□□ 1.05
SNRPA1-201ENST00000254193 ZFYP08048 801 aaPredicted RBP21.63■■□□□ 1.05
SNRPA1-201ENST00000254193 JAG1P78504 1218 aa21.63■■□□□ 1.05
SNRPA1-201ENST00000254193 APPBP2Q92624 585 aa21.63■■□□□ 1.05
SNRPA1-201ENST00000254193 CFHR5Q9BXR6 569 aa21.63■■□□□ 1.05
SNRPA1-201ENST00000254193 SERPINB13Q9UIV8 391 aa21.63■■□□□ 1.05
SNRPA1-201ENST00000254193 AFG3L2Q9Y4W6 797 aa21.63■■□□□ 1.05
SNRPA1-201ENST00000254193 SLC4A4Q9Y6R1 1079 aa21.63■■□□□ 1.05
SNRPA1-201ENST00000254193 TRIM75PA6NK02 468 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 BTBD19C9JJ37 291 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 GPR25O00155 361 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 CXCL11O14625 94 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 CYP2D6P10635 497 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 CRHR2Q13324 411 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 STRBPQ96SI9 672 aaKnown RBP21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 EHD4Q9H223 541 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 ATP8A2Q9NTI2 1148 aa21.62■■□□□ 1.05
SNRPA1-201ENST00000254193 GDF11O95390 407 aa21.61■■□□□ 1.05
SNRPA1-201ENST00000254193 MOGSQ13724 837 aa21.61■■□□□ 1.05
SNRPA1-201ENST00000254193 LRRFIP1Q32MZ4 808 aaKnown RBP21.61■■□□□ 1.05
SNRPA1-201ENST00000254193 PLEKHM2Q8IWE5 1019 aa21.61■■□□□ 1.05
SNRPA1-201ENST00000254193 ZNF296Q8WUU4 475 aaPredicted RBP21.61■■□□□ 1.05
SNRPA1-201ENST00000254193 AK9Q5TCS8 1911 aa21.61■■□□□ 1.05
SNRPA1-201ENST00000254193 M0R2C6 588 aa21.6■■□□□ 1.05
SNRPA1-201ENST00000254193 EVI5LQ96CN4 794 aa21.6■■□□□ 1.05
SNRPA1-201ENST00000254193 SEC62Q99442 399 aaKnown RBP21.6■■□□□ 1.05
SNRPA1-201ENST00000254193 CYP2D7A0A087X1C5 515 aa21.59■■□□□ 1.05
SNRPA1-201ENST00000254193 SPP2Q13103 211 aa21.59■■□□□ 1.05
SNRPA1-201ENST00000254193 TAF1CQ15572 869 aaPredicted RBP21.59■■□□□ 1.05
SNRPA1-201ENST00000254193 TATDN1Q6P1N9 297 aa21.59■■□□□ 1.05
SNRPA1-201ENST00000254193 A0A0G2JLL6 359 aaPredicted RBP21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 USP17L5A8MUK1 530 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 USP17L12C9JPN9 530 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 USP17L21D6R901 530 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 SMIM22K7EJ46 135 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 GPAA1O43292 621 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 SHMT1P34896 483 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 GABPAQ06546 454 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 NOM1Q5C9Z4 860 aaKnown RBP21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 ZMYM1Q5SVZ6 1142 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 GPAT2Q6NUI2 795 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 PRRT2Q7Z6L0 340 aaPredicted RBP21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 ANKRD23Q86SG2 305 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 DYNLL2Q96FJ2 89 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 ZBTB21Q9ULJ3 1066 aa21.58■■□□□ 1.05
SNRPA1-201ENST00000254193 GSG1L2A8MUP6 293 aa21.57■■□□□ 1.04
SNRPA1-201ENST00000254193 PDHXO00330 501 aa21.57■■□□□ 1.04
SNRPA1-201ENST00000254193 GH2P01242 217 aa21.57■■□□□ 1.04
SNRPA1-201ENST00000254193 ASNSP08243 561 aa21.57■■□□□ 1.04
SNRPA1-201ENST00000254193 ZNF280CQ8ND82 737 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms