RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 E7EVH7 732 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 TPPPO94811 219 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 FOSP01100 380 aaPredicted RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 TUBBP07437 444 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 GSPT1P15170 499 aaKnown RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 ODF2Q5BJF6 829 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 ZNF569Q5MCW4 686 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 LLGL2Q6P1M3 1020 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 CCDC80Q76M96 950 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 TMEM87AQ8NBN3 555 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 HELQQ8TDG4 1101 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 OSBPL1AQ9BXW6 950 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 PDGFDQ9GZP0 370 aaPredicted RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 HELLSQ9NRZ9 838 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 HDAC6Q9UBN7 1215 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 PARP3Q9Y6F1 533 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 IKBKGQ9Y6K9 419 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 USH1CQ9Y6N9 552 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 SETD1BQ9UPS6 1966 aaKnown RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 MYO1BO43795 1136 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 RTN2O75298 545 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 SF3A3Q12874 501 aaKnown RBP eCLIP8.58□□□□□ -1.04
USP29-201ENST00000254181 IMMTQ16891 758 aaKnown RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 NANOGNBQ7Z5D8 188 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 CCDC65Q8IXS2 484 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 RAVER1Q8IY67 606 aaKnown RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 TEKT4Q8WW24 435 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 ZMAT2Q96NC0 199 aaKnown RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 MAP2K7O14733 419 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 PDCP20941 246 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 C11orf57Q6ZUT1 292 aaPredicted RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 STAG2Q8N3U4 1231 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 CENPTQ96BT3 561 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 FAM81BQ96LP2 452 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 TRIM7Q9C029 511 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 PPP2R2CQ9Y2T4 447 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 NPHP3Q7Z494 1330 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 CARMIL1Q5VZK9 1371 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.58□□□□□ -1.04
USP29-201ENST00000254181 ARHGAP31Q2M1Z3 1444 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 CTAGE9A4FU28 777 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 RASSF10A6NK89 507 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 M0R2C6 588 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 EIF3HO15372 352 aaKnown RBP eCLIP8.58□□□□□ -1.04
USP29-201ENST00000254181 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
USP29-201ENST00000254181 RBP3P10745 1247 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 CLK1P49759 484 aaKnown RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 VSNL1P62760 191 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 DYNC1I2Q13409 638 aaKnown RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 FKBP15Q5T1M5 1219 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 EFCAB2Q5VUJ9 269 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 ZNF365Q70YC5 407 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 PLEKHM2Q8IWE5 1019 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 POLR3CQ9BUI4 534 aaPredicted RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 ZNF644Q9H582 1327 aaPredicted RBP8.58□□□□□ -1.04
USP29-201ENST00000254181 CUX1P39880 1505 aa8.58□□□□□ -1.04
USP29-201ENST00000254181 DIAPH2O60879 1101 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 HSF2BPO75031 334 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 FSBPO95073 299 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 GGCXP38435 758 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 PPP4R4Q6NUP7 873 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 KIAA1958Q8N8K9 716 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 DTNBP1Q96EV8 351 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 STAMBPL1Q96FJ0 436 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 RBM41Q96IZ5 413 aaKnown RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 GORASP1Q9BQQ3 440 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 NACA2Q9H009 215 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 ACTR5Q9H9F9 607 aaPredicted RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 PPANQ9NQ55 473 aaKnown RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 DNAAF2Q9NVR5 837 aaKnown RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 NOP53Q9NZM5 478 aaKnown RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 LIMCH1Q9UPQ0 1083 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 BZW2Q9Y6E2 419 aaKnown RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 UBASH3AP57075 661 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 PIP4K2BP78356 416 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 GOLGA8FQ08AF8 430 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 GOLGA8DPQ0D2H9 430 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 CUL4AQ13619 759 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 TAF11Q15544 211 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 DIXDC1Q155Q3 683 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 BZW1Q7L1Q6 419 aaKnown RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 CCDC89Q8N998 374 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 WDR24Q96S15 920 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 POLD4Q9HCU8 107 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 SLC39A2Q9NP94 309 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 MRPL42Q9Y6G3 142 aaKnown RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 ERICH2A1L162 156 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 ZSCAN9O15535 394 aaPredicted RBP8.57□□□□□ -1.04
USP29-201ENST00000254181 NR1I2O75469 434 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 GNAI3P08754 354 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 VCAM1P19320 739 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 TUBB4BP68371 445 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 AGAP9Q5VTM2 703 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 KCTD16Q68DU8 428 aa8.57□□□□□ -1.04
USP29-201ENST00000254181 CCDC170Q8IYT3 715 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms