RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 CHRDQ9H2X0 955 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 ELP3Q9H9T3 547 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 KANSL3Q9P2N6 904 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 COL5A3P25940 1745 aaPredicted RBP4.69□□□□□ -1.66
RBM39-201ENST00000253363 CNTNAP4Q9C0A0 1308 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 TTC24A2A3L6 582 aaPredicted RBP4.69□□□□□ -1.66
RBM39-201ENST00000253363 TPD52L2O43399 206 aaKnown RBP4.69□□□□□ -1.66
RBM39-201ENST00000253363 RHOQP17081 205 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 EZH2Q15910 746 aaKnown RBP4.69□□□□□ -1.66
RBM39-201ENST00000253363 SNX29Q8TEQ0 813 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 GMLQ99445 158 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 BCO2Q9BYV7 579 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 GPAMQ9HCL2 828 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 KBTBD4Q9NVX7 518 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 POLKQ9UBT6 870 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 PDZRN3Q9UPQ7 1066 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 NUDCQ9Y266 331 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 PALLDQ8WX93 1383 aa4.69□□□□□ -1.66
RBM39-201ENST00000253363 MAP2P11137 1827 aaKnown RBP4.69□□□□□ -1.66
RBM39-201ENST00000253363 SCN11AQ9UI33 1791 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 HTATSF1O43719 755 aaKnown RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 CYP2E1P05181 493 aaPredicted RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 SMPD1P17405 629 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 PAK2Q13177 524 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 C1orf141Q5JVX7 400 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 LINC00528Q8N1L1 170 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 SNIP1Q8TAD8 396 aaKnown RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 PANK3Q9H999 370 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 TAF1LQ8IZX4 1826 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 PHACTR2O75167 634 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 FGRP09769 529 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 ARID5AQ03989 594 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 TYRO3Q06418 890 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 OS9Q13438 667 aaPredicted RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 GNL2Q13823 731 aaKnown RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 TAF1CQ15572 869 aaPredicted RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 AKAP4Q5JQC9 854 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 C6orf118Q5T5N4 469 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 DEFB132Q7Z7B7 95 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 ZNF598Q86UK7 904 aaKnown RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 SLC43A3Q8NBI5 491 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 ZCCHC2Q9C0B9 1178 aaKnown RBP4.68□□□□□ -1.66
RBM39-201ENST00000253363 ZSWIM4Q9H7M6 989 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 ZFYVE28Q9HCC9 887 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 TMOD3Q9NYL9 352 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 RGPD2P0DJD1 1756 aa4.68□□□□□ -1.66
RBM39-201ENST00000253363 UBR2Q8IWV8 1755 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 SPINT1O43278 529 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 RAB11FIP3O75154 756 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 XYLBO75191 536 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 NEFMP07197 916 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 PHKG2P15735 406 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 GTF2E1P29083 439 aaPredicted RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 ARSDP51689 593 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 EIF4A2Q14240 407 aaKnown RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 GRM2Q14416 872 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 NBPF6Q5VWK0 638 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 SPTY2D1Q68D10 685 aaPredicted RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 ZNF654Q8IZM8 581 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 RNF217Q8TC41 542 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 NBPF4Q96M43 638 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 TEX13AQ9BXU3 409 aaPredicted RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 ITGB4P16144 1822 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 GDF9O60383 454 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 DIAPH1O60610 1272 aaKnown RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 BMP1P13497 986 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 GJA8P48165 433 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 RNF144AP50876 292 aaPredicted RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 GRIN2CQ14957 1233 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 RALBP1Q15311 655 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 PEAR1Q5VY43 1037 aaPredicted RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 PDE12Q6L8Q7 609 aaKnown RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 NBPF10Q6P3W6 841 aaKnown RBP4.67□□□□□ -1.66
RBM39-201ENST00000253363 TRIM67Q6ZTA4 783 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 NLGN1Q8N2Q7 840 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 ZIC5Q96T25 663 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.67□□□□□ -1.664e-15■■■□□ 15.3
RBM39-201ENST00000253363 BABAM1Q9NWV8 329 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 FAM8A1Q9UBU6 413 aa4.67□□□□□ -1.66
RBM39-201ENST00000253363 TUBGCP6Q96RT7 1819 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 LAMB4A4D0S4 1761 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 A0A087WZG4 1122 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 ATF4P18848 351 aaPredicted RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 PTPN12Q05209 780 aaKnown RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 BMS1Q14692 1282 aaKnown RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 R3HDM1Q15032 1099 aaKnown RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 RRS1Q15050 365 aaKnown RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 GORABQ5T7V8 394 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 IER5Q5VY09 327 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 ERMP1Q7Z2K6 904 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 KRT25Q7Z3Z0 450 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 APBB1IPQ7Z5R6 666 aaPredicted RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 C3orf58Q8NDZ4 430 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 TOR4AQ9NXH8 423 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 ZDHHC3Q9NYG2 299 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 KCNG1Q9UIX4 513 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 CCNL1Q9UK58 526 aaPredicted RBP4.66□□□□□ -1.66
RBM39-201ENST00000253363 TJP1Q07157 1748 aa4.66□□□□□ -1.66
RBM39-201ENST00000253363 SCN7AQ01118 1682 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms