RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 FAM13AO94988 1023 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 ME3Q16798 604 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
UBE4B-201ENST00000253251 RFX7Q2KHR2 1363 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 TNNT1P13805 278 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 MAP9Q49MG5 647 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 CCDC17Q96LX7 622 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 CLSTN2Q9H4D0 955 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 ADORA1P30542 326 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 ADD2P35612 726 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
UBE4B-201ENST00000253251 KCNH3Q9ULD8 1083 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 SPATA31A6Q5VVP1 1343 aa16.97■□□□□ 0.31
UBE4B-201ENST00000253251 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 ZNF174Q15697 407 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 BICD1Q96G01 975 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 GRAPQ13588 217 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
UBE4B-201ENST00000253251 CHURC1Q8WUH1 139 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 REREQ9P2R6 1566 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 TMEM131LA2VDJ0 1609 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 VWA3AA6NCI4 1184 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 H7C1D1 291 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
UBE4B-201ENST00000253251 SPAG5Q96R06 1193 aa16.96■□□□□ 0.31
UBE4B-201ENST00000253251 POLR1AO95602 1720 aaPredicted RBP16.96■□□□□ 0.31
UBE4B-201ENST00000253251 MYL5Q02045 173 aa16.96■□□□□ 0.3
UBE4B-201ENST00000253251 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.3
UBE4B-201ENST00000253251 PIK3AP1Q6ZUJ8 805 aa16.96■□□□□ 0.3
UBE4B-201ENST00000253251 URI1O94763 535 aaPredicted RBP16.95■□□□□ 0.3
UBE4B-201ENST00000253251 ARID4AP29374 1257 aaPredicted RBP16.95■□□□□ 0.3
UBE4B-201ENST00000253251 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
UBE4B-201ENST00000253251 FANCBQ8NB91 859 aa16.95■□□□□ 0.3
UBE4B-201ENST00000253251 SWAP70Q9UH65 585 aa16.95■□□□□ 0.3
UBE4B-201ENST00000253251 SASH1O94885 1247 aa16.95■□□□□ 0.3
UBE4B-201ENST00000253251 BTDP43251 543 aa16.95■□□□□ 0.3
UBE4B-201ENST00000253251 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
UBE4B-201ENST00000253251 PAXBP1Q9Y5B6 917 aa16.95■□□□□ 0.3
UBE4B-201ENST00000253251 CPS1P31327 1500 aa16.95■□□□□ 0.3
UBE4B-201ENST00000253251 AKR1B10O60218 316 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 ZBED4O75132 1171 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 SNW1Q13573 536 aaKnown RBP16.94■□□□□ 0.3
UBE4B-201ENST00000253251 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 SEC62Q99442 399 aaKnown RBP16.94■□□□□ 0.3
UBE4B-201ENST00000253251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.3
UBE4B-201ENST00000253251 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 DCAF15Q66K64 600 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 TLR7Q9NYK1 1049 aaKnown RBP16.94■□□□□ 0.3
UBE4B-201ENST00000253251 IGSF3O75054 1194 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 PLS1Q14651 629 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 NAA15Q9BXJ9 866 aaKnown RBP16.94■□□□□ 0.3
UBE4B-201ENST00000253251 TNKSO95271 1327 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 AFF2P51816 1311 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 NPR1P16066 1061 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
UBE4B-201ENST00000253251 AS3MTQ9HBK9 375 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 CWC15Q9P013 229 aaKnown RBP16.93■□□□□ 0.3
UBE4B-201ENST00000253251 PALD1Q9ULE6 856 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 A0A1B0GVL5 298 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 AXDND1Q5T1B0 1012 aaPredicted RBP16.93■□□□□ 0.3
UBE4B-201ENST00000253251 CNNM4Q6P4Q7 775 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
UBE4B-201ENST00000253251 XRCC6P12956 609 aaKnown RBP eCLIP16.93■□□□□ 0.3
UBE4B-201ENST00000253251 REXO1Q8N1G1 1221 aaKnown RBP16.93■□□□□ 0.3
UBE4B-201ENST00000253251 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 COL15A1P39059 1388 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 SSR1P43307 286 aaKnown RBP16.93■□□□□ 0.3
UBE4B-201ENST00000253251 ZNF445P59923 1031 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 GRIPAP1Q4V328 841 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 MYSM1Q5VVJ2 828 aa16.93■□□□□ 0.3
UBE4B-201ENST00000253251 RIMS1Q86UR5 1692 aaKnown RBP16.92■□□□□ 0.3
UBE4B-201ENST00000253251 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 PHKBQ93100 1093 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 PPLO60437 1756 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 JAK2O60674 1132 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 VPS72Q15906 364 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 LIG1P18858 919 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 CCT6AP40227 531 aaKnown RBP16.92■□□□□ 0.3
UBE4B-201ENST00000253251 TMCO3Q6UWJ1 677 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 CDC37L1Q7L3B6 337 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 PNMA1Q8ND90 353 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 PRIMPOLQ96LW4 560 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
UBE4B-201ENST00000253251 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
UBE4B-201ENST00000253251 SKILP12757 684 aa16.91■□□□□ 0.3
UBE4B-201ENST00000253251 KRT83P78385 493 aa16.91■□□□□ 0.3
UBE4B-201ENST00000253251 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
UBE4B-201ENST00000253251 MYL10Q9BUA6 226 aa16.91■□□□□ 0.3
UBE4B-201ENST00000253251 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
UBE4B-201ENST00000253251 CCDC186Q7Z3E2 898 aa16.91■□□□□ 0.3
UBE4B-201ENST00000253251 PAF1Q8N7H5 531 aa16.91■□□□□ 0.3
UBE4B-201ENST00000253251 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 SDR42E1Q8WUS8 393 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 SOS2Q07890 1332 aaPredicted RBP16.9■□□□□ 0.3
UBE4B-201ENST00000253251 CCNT1O60563 726 aaKnown RBP16.9■□□□□ 0.3
UBE4B-201ENST00000253251 FAM47AQ5JRC9 791 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 ADALQ6DHV7 355 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 PLVAPQ9BX97 442 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms