RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 TRIML1Q8N9V2 468 aa17.11■□□□□ 0.33
PMPCB-201ENST00000249269 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
PMPCB-201ENST00000249269 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
PMPCB-201ENST00000249269 H2AFXP16104 143 aaPredicted RBP17.1■□□□□ 0.33
PMPCB-201ENST00000249269 EVCP57679 992 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 MCM6Q14566 821 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 SUCLG2Q96I99 432 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 GINM1Q9NU53 330 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 IP6K2Q9UHH9 426 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 SALL1Q9NSC2 1324 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 YEATS4O95619 227 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 CD53P19397 219 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 TRAF1Q13077 416 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 MYSM1Q5VVJ2 828 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 Q6ZUG5 572 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 OTUD6AQ7L8S5 288 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 FILIP1Q7Z7B0 1213 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 MYLK4Q86YV6 388 aaPredicted RBP17.1■□□□□ 0.33
PMPCB-201ENST00000249269 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 MRPS27Q92552 414 aaKnown RBP17.1■□□□□ 0.33
PMPCB-201ENST00000249269 ARGLU1Q9NWB6 273 aaPredicted RBP17.1■□□□□ 0.33
PMPCB-201ENST00000249269 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
PMPCB-201ENST00000249269 IKBKBO14920 756 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 KMT5BQ4FZB7 885 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 C1orf141Q5JVX7 400 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 FAM173BQ6P4H8 233 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 NFXL1Q6ZNB6 911 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 NSUN7Q8NE18 718 aaKnown RBP17.09■□□□□ 0.33
PMPCB-201ENST00000249269 CCDC34Q96HJ3 373 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 KAZALD1Q96I82 304 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 HAUS7Q99871 368 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 ZNF215Q9UL58 517 aaPredicted RBP17.09■□□□□ 0.33
PMPCB-201ENST00000249269 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 TMCC3Q9ULS5 477 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 CHMP3Q9Y3E7 222 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 CCDC93Q567U6 631 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 CHCHD4Q8N4Q1 142 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 BICC1Q9H694 974 aaKnown RBP17.09■□□□□ 0.33
PMPCB-201ENST00000249269 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 GPR108Q9NPR9 543 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 SLC45A1Q9Y2W3 748 aa17.09■□□□□ 0.33
PMPCB-201ENST00000249269 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.33
PMPCB-201ENST00000249269 IRX1P78414 480 aaPredicted RBP17.08■□□□□ 0.33
PMPCB-201ENST00000249269 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.33
PMPCB-201ENST00000249269 WWC2Q6AWC2 1192 aa17.08■□□□□ 0.33
PMPCB-201ENST00000249269 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.33
PMPCB-201ENST00000249269 POM121Q96HA1 1249 aa17.08■□□□□ 0.33
PMPCB-201ENST00000249269 RASSF4Q9H2L5 321 aa17.08■□□□□ 0.33
PMPCB-201ENST00000249269 ADCY2Q08462 1091 aa17.08■□□□□ 0.32
PMPCB-201ENST00000249269 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.32
PMPCB-201ENST00000249269 NCAPG2Q86XI2 1143 aa17.08■□□□□ 0.32
PMPCB-201ENST00000249269 BOLA2Q9H3K6 86 aa17.08■□□□□ 0.32
PMPCB-201ENST00000249269 LGR6Q9HBX8 967 aa17.08■□□□□ 0.32
PMPCB-201ENST00000249269 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
PMPCB-201ENST00000249269 VCAM1P19320 739 aa17.07■□□□□ 0.32
PMPCB-201ENST00000249269 ZC3H6P61129 1189 aaKnown RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 EXOSC10Q01780 885 aaKnown RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 SCRN1Q12765 414 aa17.07■□□□□ 0.32
PMPCB-201ENST00000249269 CCDC178Q5BJE1 867 aa17.07■□□□□ 0.32
PMPCB-201ENST00000249269 KANK3Q6NY19 840 aa17.07■□□□□ 0.32
PMPCB-201ENST00000249269 BRAPQ7Z569 592 aa17.07■□□□□ 0.32
PMPCB-201ENST00000249269 FMR1NBQ8N0W7 255 aaPredicted RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 RABL6Q3YEC7 729 aaPredicted RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 TTC39BQ5VTQ0 682 aaPredicted RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 CCDC8Q9H0W5 538 aaPredicted RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 POLR3EQ9NVU0 708 aa17.07■□□□□ 0.32
PMPCB-201ENST00000249269 TRMT1Q9NXH9 659 aaKnown RBP17.07■□□□□ 0.32
PMPCB-201ENST00000249269 GOLGA6L9A6NEM1 432 aa17.06■□□□□ 0.32
PMPCB-201ENST00000249269 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
PMPCB-201ENST00000249269 TTC19Q6DKK2 380 aaPredicted RBP17.06■□□□□ 0.32
PMPCB-201ENST00000249269 ZNF589Q86UQ0 364 aaPredicted RBP17.06■□□□□ 0.32
PMPCB-201ENST00000249269 VMP1Q96GC9 406 aa17.06■□□□□ 0.32
PMPCB-201ENST00000249269 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
PMPCB-201ENST00000249269 JAK2O60674 1132 aa17.06■□□□□ 0.32
PMPCB-201ENST00000249269 SFPQP23246 707 aaKnown RBP eCLIP17.06■□□□□ 0.32
PMPCB-201ENST00000249269 IL4RP24394 825 aa17.06■□□□□ 0.32
PMPCB-201ENST00000249269 PLPP6Q8IY26 295 aa17.06■□□□□ 0.32
PMPCB-201ENST00000249269 KIAA1468Q9P260 1216 aa17.06■□□□□ 0.32
PMPCB-201ENST00000249269 CYP21A2P08686 494 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
PMPCB-201ENST00000249269 TNNI3KQ59H18 835 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 GOLGA6L1Q8N7Z2 621 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 FPGT-TNNI3KV9GXZ4 949 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 ENPP1P22413 925 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 AP1ARQ63HQ0 302 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 ZCCHC8Q6NZY4 707 aaKnown RBP17.05■□□□□ 0.32
PMPCB-201ENST00000249269 FBXO38Q6PIJ6 1188 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 SYNE3Q6ZMZ3 975 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
PMPCB-201ENST00000249269 FMNL3Q8IVF7 1028 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
PMPCB-201ENST00000249269 MPP4Q96JB8 637 aa17.05■□□□□ 0.32
PMPCB-201ENST00000249269 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms